Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 RNU5A-1-201ENST00000362698 116 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 Y_RNA.72-201ENST00000362894 103 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6-14P-201ENST00000384630 106 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 MIR607-201ENST00000385241 96 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 RN7SKP177-201ENST00000410567 355 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 RNU4-6P-201ENST00000410804 122 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AL356095.1-201ENST00000417217 199 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 RSL24D1P6-201ENST00000426934 401 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 CALM2P2-201ENST00000428512 440 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AC098614.3-201ENST00000438957 440 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 NEFMP1-201ENST00000443423 1006 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 SNRPGP5-201ENST00000456003 220 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AC092451.1-201ENST00000480211 153 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AC091885.1-201ENST00000506658 268 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AC098799.2-201ENST00000509466 868 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 SNORA31.8-201ENST00000516327 108 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 RN7SKP209-201ENST00000516888 304 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6-1073P-201ENST00000517182 106 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AL355836.1-201ENST00000555951 870 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AC025884.1-201ENST00000556034 378 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AC005951.2-201ENST00000576282 495 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 MIR3921-201ENST00000577308 85 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AC010525.2-201ENST00000590920 195 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AC023043.4-201ENST00000612081 449 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AC112200.1-201ENST00000625015 234 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AL354685.2-201ENST00000448218 1447 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 OR4G1P-203ENST00000641984 1631 ntBASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHA3Q9Y5H8 AC116096.1-201ENST00000566804 2314 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 ASNSP3-201ENST00000451989 1306 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 CBX3P1-201ENST00000325243 554 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 Y_RNA.86-201ENST00000363020 111 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 RN7SKP227-201ENST00000364445 330 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 RN7SKP140-201ENST00000411196 284 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 AC068533.1-201ENST00000418542 415 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 AL513185.2-201ENST00000425543 193 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 AL162395.1-201ENST00000457882 422 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 MTCO2P30-201ENST00000503662 364 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 AC104806.1-201ENST00000508720 308 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 RNU4-29P-201ENST00000515943 174 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6-685P-201ENST00000517088 95 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 OR5B10P-201ENST00000532869 642 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 AL121576.1-201ENST00000556055 276 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 MIR4644-201ENST00000579929 84 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 MIR4424-201ENST00000585257 86 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 AC008521.1-201ENST00000587471 187 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 UBE2V2P2-201ENST00000587677 504 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 AC018638.8-201ENST00000588755 281 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 LARP7P1-201ENST00000605576 316 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 RNU4-89P-201ENST00000607443 133 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 MIR6867-201ENST00000610636 67 ntBASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHA3Q9Y5H8 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 RLIMP1-201ENST00000339626 1680 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 SNORA31-201ENST00000362607 130 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 RNA5SP189-201ENST00000364920 115 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 MIR514A2-201ENST00000385131 88 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 MIR514A3-201ENST00000385132 88 ntBASIC4□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6-817P-201ENST00000391083 104 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms