Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 DUXAP4-201ENST00000603046 613 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AL451064.1-201ENST00000607718 471 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AC004067.1-201ENST00000608733 700 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AC091834.1-201ENST00000614543 472 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AL355810.1-201ENST00000614629 552 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AC084035.1-201ENST00000634543 607 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 MIR622-201ENST00000638396 96 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 FARSBP1-201ENST00000435808 1778 ntBASIC3.29□□□□□ -1.88
YIPF1Q9Y548 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.29□□□□□ -1.88
YIPF1Q9Y548 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 RNU4-1-201ENST00000363925 141 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 RNU4-65P-201ENST00000410473 140 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 RNU2-66P-201ENST00000410650 161 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AC127391.1-201ENST00000411737 98 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AC007390.1-201ENST00000415722 356 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AC007283.2-201ENST00000424739 197 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 MTATP6P4-201ENST00000427725 675 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 RABEPKP1-201ENST00000440529 1026 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 RPL26P6-201ENST00000440913 438 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 RPL23AP31-201ENST00000456160 467 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 RPS4XP13-201ENST00000483219 789 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AC096576.1-201ENST00000489014 359 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AC097462.2-201ENST00000504623 481 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 VN1R104P-201ENST00000505115 1009 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 SNORA31.22-201ENST00000517204 135 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 DEFB108A-201ENST00000530110 222 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AC012443.1-201ENST00000605605 231 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AC012557.2-201ENST00000605919 418 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AC103710.1-201ENST00000610003 901 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 TUG1_2.1-201ENST00000614234 87 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AL133173.2-201ENST00000614270 90 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AC008121.2-201ENST00000614647 523 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AC006338.1-201ENST00000618453 749 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AL603758.1-201ENST00000618654 241 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AC091903.1-201ENST00000624322 454 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 RIOK3P1-201ENST00000418778 1528 ntBASIC3.28□□□□□ -1.88
YIPF1Q9Y548 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
YIPF1Q9Y548 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.28□□□□□ -1.89
YIPF1Q9Y548 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 DDX10P1-201ENST00000448545 1933 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 OR5J1P-201ENST00000313544 939 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 RNU6-76P-201ENST00000384060 104 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 SNORD15B-201ENST00000384714 146 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 SNORD67-201ENST00000390833 111 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 RPL23AP32-201ENST00000395315 459 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AL136372.1-201ENST00000403060 228 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 RNU6-55P-201ENST00000411092 107 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 RNU6-954P-201ENST00000411355 107 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AC104651.1-201ENST00000427559 735 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AC119618.1-201ENST00000434191 222 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 HMGB1P12-201ENST00000438594 598 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 ELOCP30-201ENST00000447108 299 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AC108059.3-201ENST00000456388 214 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 RN7SKP289-201ENST00000517244 295 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.27□□□□□ -1.89
YIPF1Q9Y548 MED28P6-201ENST00000558776 231 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 H3F3AP1-201ENST00000559984 334 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AC009063.1-201ENST00000563342 702 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 MIR3690-201ENST00000580266 75 ntBASIC3.27□□□□□ -1.89
YIPF1Q9Y548 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms