Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 AL591926.8-201ENST00000616876 211 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 AL079305.1-201ENST00000623159 3008 ntBASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HCN4Q9Y3Q4 AL592437.2-201ENST00000421655 2434 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 Y_RNA.471-201ENST00000384312 102 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 RNU6-933P-201ENST00000384424 107 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 SNORA70E-201ENST00000384492 135 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 MIR548H3-201ENST00000408771 118 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 RNF10P1-201ENST00000418589 369 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 PIGPP3-201ENST00000425307 415 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AC004383.1-201ENST00000438135 289 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AL590399.6-201ENST00000446396 307 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 RNU6-1037P-201ENST00000459571 107 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 ABCC13-202ENST00000463099 3842 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AC006427.1-201ENST00000514359 712 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 ENPP7P9-201ENST00000514456 627 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 RNU6-513P-201ENST00000516104 104 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AC008694.2-201ENST00000517591 306 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AC008489.1-201ENST00000524271 483 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AL158827.2-201ENST00000602494 330 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AC009779.6-201ENST00000603972 165 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 MIR1244-1-201ENST00000612829 85 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 RMST_4.1-201ENST00000616886 107 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AC091953.5-201ENST00000622919 233 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AL691447.3-201ENST00000635020 330 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 MIR1244-3-201ENST00000635744 85 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 U2.22-201ENST00000636441 106 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 MIR1244-2-201ENST00000636449 85 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 MIR1244-4-202ENST00000636813 85 ntBASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HCN4Q9Y3Q4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 AC104260.2-201ENST00000623551 3497 ntBASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 Y_RNA.180-201ENST00000363867 113 ntBASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 RNU6-882P-201ENST00000391025 103 ntBASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 KNOP1P3-201ENST00000446933 426 ntBASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 AC008958.1-201ENST00000511047 682 ntBASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 APOOP4-201ENST00000513530 597 ntBASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 RNU6-927P-201ENST00000516199 100 ntBASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 RNA5SP230-201ENST00000517039 122 ntBASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 CYCSP29-201ENST00000533731 318 ntBASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 MIR5696-201ENST00000578474 85 ntBASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 AL355877.2-201ENST00000603670 358 ntBASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 AC010201.1-201ENST00000605051 540 ntBASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 MIR3976-201ENST00000606807 139 ntBASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 AL034549.2-201ENST00000618285 3373 ntBASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 OR4F13P-202ENST00000560066 2054 ntBASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HCN4Q9Y3Q4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms