Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AL445305.1-201ENST00000432577 575 ntBASIC1.83□□□□□ -2.12
SHANK2Q9UPX8 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.83□□□□□ -2.12
SHANK2Q9UPX8 AL035407.2-201ENST00000454090 378 ntBASIC1.83□□□□□ -2.12
SHANK2Q9UPX8 AC023790.1-201ENST00000482174 347 ntBASIC1.83□□□□□ -2.12
SHANK2Q9UPX8 RN7SKP265-201ENST00000516448 223 ntBASIC1.83□□□□□ -2.12
SHANK2Q9UPX8 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.83□□□□□ -2.12
SHANK2Q9UPX8 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.83□□□□□ -2.12
SHANK2Q9UPX8 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SHANK2Q9UPX8 RPS15AP11-201ENST00000594193 385 ntBASIC1.83□□□□□ -2.12
SHANK2Q9UPX8 AC009090.3-201ENST00000616553 565 ntBASIC1.83□□□□□ -2.12
SHANK2Q9UPX8 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.83□□□□□ -2.12
SHANK2Q9UPX8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.83□□□□□ -2.12
SHANK2Q9UPX8 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
SHANK2Q9UPX8 SNORA70.7-201ENST00000384159 133 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 RNU6-1181P-201ENST00000384191 106 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 MIR216A-201ENST00000385063 110 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 RPS20P15-201ENST00000412792 311 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC096632.1-201ENST00000427395 310 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 VN1R108P-201ENST00000431580 830 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 ARL5AP3-201ENST00000439327 386 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 SDCBPP1-201ENST00000440192 890 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 HAR1A.1-201ENST00000459583 118 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 HMGB3P17-201ENST00000504195 649 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 ARL2BPP4-201ENST00000506854 471 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC108078.1-201ENST00000508073 725 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC113155.1-201ENST00000511141 769 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 RNA5SP395-201ENST00000516567 118 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC083923.1-201ENST00000523708 376 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC087373.1-201ENST00000524920 491 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 MTCYBP41-201ENST00000528913 1123 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 SUB1P4-201ENST00000566062 339 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC015849.6-201ENST00000605454 474 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC113194.1-201ENST00000606037 500 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 RPL31P63-201ENST00000422565 375 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC233728.2-201ENST00000425348 757 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 RPS3AP44-201ENST00000425466 790 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC087879.1-201ENST00000474343 374 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC110792.2-201ENST00000510278 224 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC008837.2-201ENST00000513076 418 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 OSBPL9P3-201ENST00000534523 595 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC096772.1-201ENST00000609146 564 ntBASIC1.82□□□□□ -2.12
SHANK2Q9UPX8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SHANK2Q9UPX8 AL390862.1-201ENST00000635467 1469 ntBASIC1.81□□□□□ -2.12
SHANK2Q9UPX8 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SHANK2Q9UPX8 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.81□□□□□ -2.12
SHANK2Q9UPX8 PGBD4P6-201ENST00000421501 610 ntBASIC1.81□□□□□ -2.12
SHANK2Q9UPX8 AC023347.2-201ENST00000433994 462 ntBASIC1.81□□□□□ -2.12
SHANK2Q9UPX8 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SHANK2Q9UPX8 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.81□□□□□ -2.12
SHANK2Q9UPX8 AC021382.1-201ENST00000483523 359 ntBASIC1.81□□□□□ -2.12
SHANK2Q9UPX8 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.81□□□□□ -2.12
SHANK2Q9UPX8 AC114801.2-201ENST00000503825 781 ntBASIC1.81□□□□□ -2.12
SHANK2Q9UPX8 7SK.7-201ENST00000603504 247 ntBASIC1.81□□□□□ -2.12
SHANK2Q9UPX8 AL391834.1-201ENST00000609609 560 ntBASIC1.81□□□□□ -2.12
SHANK2Q9UPX8 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SHANK2Q9UPX8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.8□□□□□ -2.12
SHANK2Q9UPX8 EBAG9P1-201ENST00000418955 543 ntBASIC1.8□□□□□ -2.12
SHANK2Q9UPX8 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.8□□□□□ -2.12
SHANK2Q9UPX8 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SHANK2Q9UPX8 RPL31P41-201ENST00000477967 372 ntBASIC1.8□□□□□ -2.12
SHANK2Q9UPX8 AC104685.1-201ENST00000502445 371 ntBASIC1.8□□□□□ -2.12
SHANK2Q9UPX8 AC090821.2-201ENST00000523552 176 ntBASIC1.8□□□□□ -2.12
SHANK2Q9UPX8 AC008127.2-201ENST00000549925 1075 ntBASIC1.8□□□□□ -2.12
SHANK2Q9UPX8 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.8□□□□□ -2.12
SHANK2Q9UPX8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.8□□□□□ -2.12
SHANK2Q9UPX8 AC099654.7-201ENST00000635788 2127 ntBASIC1.79□□□□□ -2.12
SHANK2Q9UPX8 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.79□□□□□ -2.12
SHANK2Q9UPX8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.79□□□□□ -2.12
SHANK2Q9UPX8 AL445687.1-201ENST00000439946 251 ntBASIC1.79□□□□□ -2.12
SHANK2Q9UPX8 LARP7P4-201ENST00000481075 878 ntBASIC1.79□□□□□ -2.12
SHANK2Q9UPX8 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.79□□□□□ -2.12
SHANK2Q9UPX8 RNU6-405P-201ENST00000516637 110 ntBASIC1.79□□□□□ -2.12
SHANK2Q9UPX8 RNU6-113P-201ENST00000516653 101 ntBASIC1.79□□□□□ -2.12
SHANK2Q9UPX8 RNU6-467P-201ENST00000517027 110 ntBASIC1.79□□□□□ -2.12
SHANK2Q9UPX8 CASP1P1-201ENST00000526345 212 ntBASIC1.79□□□□□ -2.12
SHANK2Q9UPX8 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.79□□□□□ -2.12
SHANK2Q9UPX8 AC008962.1-201ENST00000605729 304 ntBASIC1.79□□□□□ -2.12
SHANK2Q9UPX8 AL590282.1-201ENST00000610379 1136 ntBASIC1.79□□□□□ -2.12
SHANK2Q9UPX8 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.79□□□□□ -2.12
SHANK2Q9UPX8 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SHANK2Q9UPX8 AC080100.1-201ENST00000624239 5356 ntBASIC1.78□□□□□ -2.12
SHANK2Q9UPX8 RNU6-335P-201ENST00000364563 113 ntBASIC1.78□□□□□ -2.12
SHANK2Q9UPX8 MIR320B1-201ENST00000390209 79 ntBASIC1.78□□□□□ -2.12
SHANK2Q9UPX8 AIMP1P2-201ENST00000425294 312 ntBASIC1.78□□□□□ -2.12
SHANK2Q9UPX8 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.78□□□□□ -2.12
SHANK2Q9UPX8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.78□□□□□ -2.12
SHANK2Q9UPX8 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.78□□□□□ -2.12
SHANK2Q9UPX8 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SHANK2Q9UPX8 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
SHANK2Q9UPX8 RNU7-27P-201ENST00000459281 62 ntBASIC1.78□□□□□ -2.12
SHANK2Q9UPX8 AC021087.2-201ENST00000504656 1203 ntBASIC1.78□□□□□ -2.12
SHANK2Q9UPX8 RNA5SP337-201ENST00000517007 109 ntBASIC1.78□□□□□ -2.12
SHANK2Q9UPX8 SETP7-201ENST00000552169 453 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms