Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RN7SL652P-201ENST00000577769 300 ntBASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 AL591516.1-201ENST00000611326 274 ntBASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 AC005344.1-201ENST00000613391 459 ntBASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 AL512643.1-201ENST00000635735 524 ntBASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
ZC3H4Q9UPT8 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 RN7SKP280-201ENST00000364196 304 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 RNU6-596P-201ENST00000365395 98 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 SNORA70E-201ENST00000384492 135 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 RNU6-14P-201ENST00000384630 106 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 Y_RNA.555-201ENST00000384673 110 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 RNU4-78P-201ENST00000410940 126 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 RNU6-325P-201ENST00000411132 105 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 RN7SL303P-201ENST00000469773 251 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 SNORA81.3-201ENST00000517283 198 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 OR4H12P-201ENST00000556269 907 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 AMZ2P1-203ENST00000565833 850 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 MIR4444-1-201ENST00000581696 74 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 MIR4444-2-201ENST00000584390 74 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 AC006130.2-201ENST00000586202 326 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 AC022726.1-201ENST00000587475 207 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 AC073410.2-201ENST00000603240 332 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 AC010201.1-201ENST00000605051 540 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 MIR3976-201ENST00000606807 139 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 AC019206.1-201ENST00000621938 425 ntBASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ZC3H4Q9UPT8 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.9□□□□□ -1.46
ZC3H4Q9UPT8 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
ZC3H4Q9UPT8 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.9□□□□□ -1.46
ZC3H4Q9UPT8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ZC3H4Q9UPT8 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
ZC3H4Q9UPT8 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
ZC3H4Q9UPT8 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 MIR153-1-201ENST00000384914 90 ntBASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 RNU6-817P-201ENST00000391083 104 ntBASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 RPS26P8-201ENST00000393490 348 ntBASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 MIR548H3-201ENST00000408771 118 ntBASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 FCF1P4-201ENST00000448326 183 ntBASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 AL139109.1-201ENST00000455491 297 ntBASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 MRPL49P2-201ENST00000521066 465 ntBASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 LINC01109-201ENST00000603837 3081 ntBASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
ZC3H4Q9UPT8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 AL672167.1-205ENST00000641112 3080 ntBASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 Y_RNA.150-201ENST00000363562 102 ntBASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 RNU6-371P-201ENST00000364283 108 ntBASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 SNORA70.4-201ENST00000365509 134 ntBASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 RPL21P67-201ENST00000402896 478 ntBASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 AC009237.10-201ENST00000414112 510 ntBASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 SSXP9-201ENST00000417503 292 ntBASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 RPL21P38-201ENST00000418090 167 ntBASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 SALL4P2-201ENST00000423288 2910 ntBASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 LINC01399-202ENST00000458450 244 ntBASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 HMGN2P13-201ENST00000476476 274 ntBASIC5.89□□□□□ -1.47
ZC3H4Q9UPT8 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms