Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 AC006065.5-201ENST00000623427 349 ntBASIC4.93□□□□□ -1.62
ZNRF3Q9ULT6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
ZNRF3Q9ULT6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZNRF3Q9ULT6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZNRF3Q9ULT6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.93□□□□□ -1.62
ZNRF3Q9ULT6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZNRF3Q9ULT6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZNRF3Q9ULT6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.93□□□□□ -1.62
ZNRF3Q9ULT6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 AL672167.1-203ENST00000641299 2975 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 MAPK10-372ENST00000641954 3413 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 MIR34B-201ENST00000385076 84 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 Y_RNA.579-201ENST00000390939 94 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 RNU6-882P-201ENST00000391025 103 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 AL583834.1-201ENST00000406943 343 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 RPL37P10-201ENST00000412884 288 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 VN1R36P-201ENST00000414936 291 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 RPL7P10-201ENST00000417407 739 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 AC005019.1-201ENST00000436455 431 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 GTF2IP13-201ENST00000438487 386 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 AC012181.1-201ENST00000479895 423 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 AP006587.4-201ENST00000526053 529 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 AL121603.1-201ENST00000553815 142 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 MIR4790-201ENST00000577799 79 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 AC006116.10-201ENST00000591836 581 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 AC006272.2-201ENST00000594725 163 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 AC104763.2-201ENST00000604179 382 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 AC009570.1-201ENST00000609599 745 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 AC134503.1-201ENST00000633048 54 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 NOL8P1-201ENST00000508336 3529 ntBASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ZNRF3Q9ULT6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 MIR548K-201ENST00000408406 116 ntBASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 AL358472.1-201ENST00000431295 329 ntBASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 ABCF2P2-201ENST00000450549 296 ntBASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 RNU6-256P-201ENST00000516747 97 ntBASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 RNU6-1088P-201ENST00000516850 104 ntBASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 AC135001.1-201ENST00000544546 283 ntBASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 AC091516.1-201ENST00000549191 703 ntBASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 AC025627.2-201ENST00000576220 160 ntBASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 AC104662.1-201ENST00000604448 511 ntBASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 AC004696.1-201ENST00000614345 607 ntBASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 AC084781.2-201ENST00000615568 161 ntBASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 AC103705.1-201ENST00000619013 241 ntBASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 MTND4LP32-201ENST00000636111 270 ntBASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ZNRF3Q9ULT6 MAPK10-303ENST00000641324 3959 ntBASIC4.9□□□□□ -1.62
ZNRF3Q9ULT6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ZNRF3Q9ULT6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
ZNRF3Q9ULT6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
ZNRF3Q9ULT6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ZNRF3Q9ULT6 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ZNRF3Q9ULT6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.9□□□□□ -1.62
ZNRF3Q9ULT6 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.9□□□□□ -1.62
ZNRF3Q9ULT6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.62
ZNRF3Q9ULT6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ZNRF3Q9ULT6 MIR548P-201ENST00000408336 84 ntBASIC4.9□□□□□ -1.63
ZNRF3Q9ULT6 SYF2P2-201ENST00000417620 583 ntBASIC4.9□□□□□ -1.63
ZNRF3Q9ULT6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ZNRF3Q9ULT6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.9□□□□□ -1.63
ZNRF3Q9ULT6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.9□□□□□ -1.63
ZNRF3Q9ULT6 RPL29P14-201ENST00000495837 428 ntBASIC4.9□□□□□ -1.63
ZNRF3Q9ULT6 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms