Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 SNORA31.22-201ENST00000517204 135 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 IGKV2-23-201ENST00000518729 323 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 AC090572.1-201ENST00000519251 160 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 AC055876.1-202ENST00000567053 138 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 MIR3146-201ENST00000580367 79 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 MIR4425-201ENST00000580572 84 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 BNIP3P10-201ENST00000605360 577 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 TUG1_2.1-201ENST00000614234 87 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 AL391261.4-201ENST00000616012 481 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 YWHAEP7-203ENST00000622054 312 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 AC068724.3-201ENST00000625906 87 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP25Q9UHP3 CKAP2P1-201ENST00000555477 2049 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.32□□□□□ -1.72
USP25Q9UHP3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP25Q9UHP3 RLIMP1-201ENST00000339626 1680 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 AL353746.1-201ENST00000566293 6881 ntBASIC4.32□□□□□ -1.72
USP25Q9UHP3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP25Q9UHP3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP25Q9UHP3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 Y_RNA.72-201ENST00000362894 103 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 SNORA70C-201ENST00000384538 135 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 MIR1193-201ENST00000408109 78 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 UBE2FP1-201ENST00000416536 447 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 MRPL50P2-201ENST00000416821 482 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 AC016831.2-201ENST00000417179 352 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 RPL27AP8-201ENST00000424277 446 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 AL162389.1-201ENST00000449233 177 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 AC006480.1-201ENST00000449887 378 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 NUTF2P7-201ENST00000453086 375 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 RPL7P19-201ENST00000469948 618 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USP25Q9UHP3 RPS15AP36-201ENST00000492022 382 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 LRRC34P2-201ENST00000514850 553 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 SNORA40.12-201ENST00000516329 111 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 GLYCAM1-201ENST00000546596 285 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 MIR3921-201ENST00000577308 85 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 AC105224.1-201ENST00000587055 421 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 AP001029.3-201ENST00000588063 596 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 KC877982.1-201ENST00000602313 470 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 AC025449.1-201ENST00000603896 529 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 AL121757.2-201ENST00000611223 313 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 AC099654.10-201ENST00000640395 161 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 AC058791.1-201ENST00000608412 3198 ntBASIC4.31□□□□□ -1.72
USP25Q9UHP3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP25Q9UHP3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.31□□□□□ -1.72
USP25Q9UHP3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP25Q9UHP3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP25Q9UHP3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP25Q9UHP3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP25Q9UHP3 Y_RNA.126-201ENST00000363382 111 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 RNY4P16-201ENST00000364768 94 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 RNA5SP479-201ENST00000364858 117 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 SNORA23-201ENST00000365128 182 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 MIR184-201ENST00000384962 84 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 RN7SKP263-201ENST00000411194 309 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.3□□□□□ -1.72
USP25Q9UHP3 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 GPR143P-201ENST00000434155 205 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.3□□□□□ -1.72
USP25Q9UHP3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.3□□□□□ -1.72
USP25Q9UHP3 AC078785.3-201ENST00000476607 425 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP25Q9UHP3 AC020893.1-201ENST00000502452 580 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.3□□□□□ -1.72
USP25Q9UHP3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP25Q9UHP3 AL359273.1-201ENST00000510918 627 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 RN7SKP60-201ENST00000516985 239 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 RNA5SP337-201ENST00000517007 109 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.3□□□□□ -1.72
USP25Q9UHP3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.3□□□□□ -1.72
USP25Q9UHP3 HIF1AP1-201ENST00000553642 175 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.3□□□□□ -1.72
USP25Q9UHP3 HMGB1P6-201ENST00000569046 646 ntBASIC4.3□□□□□ -1.72
USP25Q9UHP3 AC006116.10-201ENST00000591836 581 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms