Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC098591.2-201ENST00000510152 315 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 RNU6-1137P-201ENST00000517073 99 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 RNU4-60P-201ENST00000517239 135 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 MIR4293-201ENST00000584305 78 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AF038458.1-201ENST00000588406 262 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 IGHV3-29-201ENST00000604817 344 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AC012443.1-201ENST00000605605 231 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AL357559.1-201ENST00000622228 274 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 MIR6500-201ENST00000622700 86 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AL359893.1-201ENST00000447628 1580 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 API5P2-201ENST00000397055 1498 ntBASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 MTND5P19-201ENST00000424872 1794 ntBASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 RNU6-432P-201ENST00000384196 109 ntBASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 SKA2P1-201ENST00000425592 390 ntBASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 ELOCP24-201ENST00000456370 334 ntBASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 RNA5SP246-201ENST00000458909 119 ntBASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 SNORD108-201ENST00000459332 71 ntBASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 AC108145.1-201ENST00000503770 153 ntBASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 AC007938.3-201ENST00000604965 623 ntBASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 AC084757.4-201ENST00000616350 526 ntBASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 AL138721.1-201ENST00000616756 179 ntBASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 AC012314.7-201ENST00000619693 93 ntBASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 AC055839.1-201ENST00000634467 498 ntBASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM7Q9NR12 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 AC016588.2-201ENST00000632484 3021 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 Y_RNA.112-201ENST00000363250 102 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 RNU6-339P-201ENST00000384310 107 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 SNORD51-201ENST00000384320 80 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 RNU6-837P-201ENST00000391056 108 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 EIF4E2P1-201ENST00000393781 255 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 CISD1P1-201ENST00000393907 327 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 SOD2P1-201ENST00000396543 562 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 RNU4-46P-201ENST00000410818 138 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 RBMY1KP-201ENST00000423480 476 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 RAC1P6-201ENST00000423911 575 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 NOTCH2P1-201ENST00000443481 624 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 AC005008.1-201ENST00000456151 612 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 AL135752.1-201ENST00000479477 471 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 RPL21P93-201ENST00000480465 489 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 RNU6-1092P-201ENST00000516955 87 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 COX6CP5-201ENST00000527162 228 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 AC100770.1-201ENST00000532310 322 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 OR11H5P-201ENST00000554039 926 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 AC138761.3-201ENST00000579993 334 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 MIR4503-201ENST00000582187 83 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 SRGNP1-201ENST00000603392 451 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 AC124312.5-201ENST00000604451 268 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 AC006065.5-201ENST00000623427 349 ntBASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 TPTE2P4-201ENST00000258589 1605 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms