Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 MTND2P33-201ENST00000506452 1031 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 MTND4LP22-201ENST00000508209 276 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 RNA5SP385-201ENST00000515947 110 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 RNU6-445P-201ENST00000516949 107 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 RNA5SP291-201ENST00000517222 105 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 OR5B19P-201ENST00000531766 928 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AP000867.2-201ENST00000532468 320 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC135279.1-201ENST00000543493 504 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 CYCSP30-201ENST00000546447 172 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 HMGB1P14-201ENST00000557424 591 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AL391840.1-201ENST00000571144 367 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC053481.4-201ENST00000583164 216 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC073648.5-201ENST00000603502 305 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC104763.2-201ENST00000604179 382 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC104073.3-201ENST00000610942 955 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC006338.2-201ENST00000616864 791 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC136475.10-201ENST00000620253 385 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC068137.4-201ENST00000638485 296 ntBASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP1AQ9HD42 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 AC073343.1-201ENST00000328239 651 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 RNU6-623P-201ENST00000363143 105 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 RNU6-288P-201ENST00000363690 104 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 SNORD116-4-201ENST00000384733 96 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 RNU6-817P-201ENST00000391083 104 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 AL117339.2-201ENST00000430475 180 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 BX679664.1-201ENST00000434429 253 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 PRDX3P3-201ENST00000447765 522 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 AC034236.1-201ENST00000469891 373 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 AC138853.1-201ENST00000503549 823 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 AC010460.1-201ENST00000507087 466 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 AC091133.4-201ENST00000511142 308 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 APOOP4-201ENST00000513530 597 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 RNA5SP290-201ENST00000517133 127 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 AP003392.2-201ENST00000527269 208 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 HMGB1P6-201ENST00000569046 646 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 AC024619.4-201ENST00000580924 316 ntBASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP1AQ9HD42 RPL32P3-201ENST00000359025 275 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 RN7SKP280-201ENST00000364196 304 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 RNU6-140P-201ENST00000384566 108 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 MIR937-201ENST00000401271 86 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 RNA5SP317-201ENST00000410176 116 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 RNU2-39P-201ENST00000410604 198 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 RNA5SP311-201ENST00000411290 116 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC092809.3-201ENST00000415453 231 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AL139247.1-201ENST00000422768 325 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC104651.1-201ENST00000427559 735 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 ELOCP14-201ENST00000428070 331 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 MTCO2P11-201ENST00000431069 680 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 HMGB1P27-201ENST00000431429 603 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 MTATP6P16-201ENST00000434543 526 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 ELOCP7-201ENST00000439968 331 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 RPS3AP46-201ENST00000448352 682 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC125238.1-201ENST00000448842 249 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC132479.1-201ENST00000449160 144 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 RN7SL442P-201ENST00000473804 320 ntBASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.06□□□□□ -1.92
CHMP1AQ9HD42 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms