Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC018630.1-201ENST00000541376 925 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC128657.1-201ENST00000549459 145 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC069200.1-201ENST00000609511 323 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AL603758.1-201ENST00000618654 241 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 YWHAEP7-203ENST00000622054 312 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC243312.2-201ENST00000623340 601 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AL034408.1-202ENST00000636088 415 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC009093.8-201ENST00000641769 292 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 CKAP2P1-201ENST00000555477 2049 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC073073.2-201ENST00000609827 2578 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 ZNF285B-201ENST00000561698 1767 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 AC116096.1-201ENST00000566804 2314 ntBASIC3.81□□□□□ -1.8
USP29Q9HBJ7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP29Q9HBJ7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AL365440.1-201ENST00000436135 2167 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 MIR208A-201ENST00000362287 71 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 RNU6-525P-201ENST00000363685 104 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 SNORA7.2-201ENST00000364446 145 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 RNU6-606P-201ENST00000384721 111 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 RNU2-36P-201ENST00000410361 191 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 MTCO3P12-201ENST00000416718 547 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 SSXP9-201ENST00000417503 292 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 SDCBPP3-201ENST00000419629 891 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 MTATP6P16-201ENST00000434543 526 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 GAPDHP27-201ENST00000447427 1020 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 SNRPGP6-201ENST00000451124 220 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 CACYBPP2-201ENST00000453625 678 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 SNRPGP5-201ENST00000456003 220 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 RNU6-261P-201ENST00000459506 102 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AL133162.1-201ENST00000463228 453 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 UBE2CP3-201ENST00000502715 450 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 RNU2-10P-201ENST00000516375 211 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AC100870.1-201ENST00000522035 505 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 FAM60DP-201ENST00000524174 632 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 OR4R1P-201ENST00000529879 463 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 OR5BN1P-201ENST00000532955 829 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AC008011.1-201ENST00000545989 227 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AL121603.1-201ENST00000553815 142 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 RPL21P12-201ENST00000559810 515 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 MIR5187-201ENST00000583479 76 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 KLKP1-201ENST00000595979 403 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AL357078.3-201ENST00000607528 618 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 RMST_3.1-201ENST00000611651 109 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 TUG1_2.1-201ENST00000614234 87 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AC004696.1-201ENST00000614345 607 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AL450472.3-201ENST00000615578 367 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AC092628.2-201ENST00000622492 339 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 MIR3662-201ENST00000637030 95 ntBASIC3.8□□□□□ -1.8
USP29Q9HBJ7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
USP29Q9HBJ7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC007685.1-201ENST00000329806 452 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 RNU6-223P-201ENST00000362830 107 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 RNA5SP189-201ENST00000364920 115 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 RNU5E-6P-201ENST00000365574 115 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 RNU6-629P-201ENST00000384061 103 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 U8.11-201ENST00000384699 133 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 U8.12-201ENST00000384701 133 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 RNU4-65P-201ENST00000410473 140 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC017083.1-201ENST00000428093 483 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC090774.1-201ENST00000435925 246 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 BNIP3P2-201ENST00000441221 577 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms