Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC092047.1-201ENST00000424997 240 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 RPL23AP82-202ENST00000427528 469 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 OR2AS1P-201ENST00000427827 319 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 NEFMP1-201ENST00000443423 1006 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC079448.1-201ENST00000449377 373 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 C1DP4-201ENST00000455429 424 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 RNU6-953P-201ENST00000459154 107 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 SNORA31.3-201ENST00000516029 96 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 RN7SKP60-201ENST00000516985 239 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC009063.1-201ENST00000563342 702 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC098848.2-201ENST00000588023 330 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 GLUD1P4-201ENST00000590914 418 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC015540.1-201ENST00000615828 501 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC138649.3-201ENST00000622154 254 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC073308.1-201ENST00000623696 305 ntBASIC3.39□□□□□ -1.87
BRF2Q9HAW0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
BRF2Q9HAW0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 SNORD9-201ENST00000362566 104 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 RNU6-960P-201ENST00000364056 120 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 RNU6-169P-201ENST00000365336 107 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 RNU6-259P-201ENST00000383999 107 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 EI24P2-201ENST00000397776 1076 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AC093106.2-201ENST00000428212 385 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 GPR143P-201ENST00000434155 205 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 RPL36AP6-201ENST00000435770 321 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 NOTCH2P1-201ENST00000443481 624 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 TPTE2P5-203ENST00000458118 728 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AL135752.1-201ENST00000479477 471 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 SNORA70.19-201ENST00000516717 90 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 RNU6-410P-201ENST00000517006 107 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 RNU6-1220P-201ENST00000517126 108 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 RNA5SP290-201ENST00000517133 127 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 DUXAP2-201ENST00000519198 589 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AC078795.2-201ENST00000602835 1252 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 Z84480.1-201ENST00000605131 311 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AP002360.4-201ENST00000606980 481 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AC007998.5-201ENST00000622938 237 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.38□□□□□ -1.87
BRF2Q9HAW0 AL359693.1-201ENST00000614959 2407 ntBASIC3.38□□□□□ -1.87
BRF2Q9HAW0 MTND5P29-201ENST00000458676 1807 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 CR848007.1-201ENST00000442354 1699 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 OR5J1P-201ENST00000313544 939 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 RNU6-1167P-201ENST00000363227 94 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 RNU6-188P-201ENST00000364207 107 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 Y_RNA.245-201ENST00000364493 95 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 RNU6-217P-201ENST00000384164 104 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 SNORA57.1-201ENST00000391227 145 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 GSTA9P-201ENST00000406231 611 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms