Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RNA5SP258-201ENST00000362750 119 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 RNU6-533P-201ENST00000384144 107 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 Y_RNA.516-201ENST00000384541 124 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 RNU6-821P-201ENST00000390995 107 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 RPS20P2-201ENST00000402520 389 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 USP9YP13-201ENST00000417797 480 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 RPL21P32-201ENST00000419877 477 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.45□□□□□ -1.86
UPF2Q9HAU5 AC006548.1-201ENST00000427470 102 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.45□□□□□ -1.86
UPF2Q9HAU5 AL513043.1-201ENST00000439124 535 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
UPF2Q9HAU5 SUMO2P2-201ENST00000456482 255 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 AC034236.1-201ENST00000469891 373 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 AC003982.1-202ENST00000469928 248 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UPF2Q9HAU5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.45□□□□□ -1.86
UPF2Q9HAU5 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.45□□□□□ -1.86
UPF2Q9HAU5 AL133271.1-201ENST00000538229 291 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 AC024224.1-201ENST00000538284 609 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.45□□□□□ -1.86
UPF2Q9HAU5 SYF2P1-201ENST00000550658 413 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.45□□□□□ -1.86
UPF2Q9HAU5 AC009063.1-201ENST00000563342 702 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.45□□□□□ -1.86
UPF2Q9HAU5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.45□□□□□ -1.86
UPF2Q9HAU5 SEPT7P9-203ENST00000604116 343 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 AL159169.3-201ENST00000608871 561 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.45□□□□□ -1.86
UPF2Q9HAU5 AL596245.1-201ENST00000618994 362 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 AL359740.1-201ENST00000624340 592 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 CR381572.1-201ENST00000625098 102 ntBASIC3.45□□□□□ -1.86
UPF2Q9HAU5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
UPF2Q9HAU5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
UPF2Q9HAU5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 RNU5F-7P-201ENST00000363696 115 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 Y_RNA.234-201ENST00000364409 97 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 SNORA54-201ENST00000384281 123 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 SNORA40.3-201ENST00000390964 122 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 SAR1AP2-201ENST00000392696 594 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 Y_RNA.608-201ENST00000410647 95 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 MTCO1P17-201ENST00000411522 491 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC078974.1-201ENST00000411597 223 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 RAD23BP2-201ENST00000416003 1207 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 MTCO2P5-201ENST00000422621 426 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 DNAJC19P4-201ENST00000440115 345 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 FAM103A2P-201ENST00000444122 354 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 MRPL50P4-201ENST00000446432 475 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 PRDX3P3-201ENST00000447765 522 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 NANOGNBP1-201ENST00000448444 480 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 USP9YP12-201ENST00000450481 570 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AL590365.1-201ENST00000450788 243 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AL353691.1-201ENST00000451332 387 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 RPS24P6-201ENST00000452670 400 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 Z82190.1-201ENST00000454534 490 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AL590639.1-201ENST00000456484 337 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 HMGN2P16-201ENST00000456802 261 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 snoU13.24-201ENST00000458998 104 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC023424.2-201ENST00000493479 777 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 HMGB1P22-201ENST00000505315 124 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 RNU6-27P-201ENST00000516146 107 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 RNU6-1003P-201ENST00000517099 105 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 MTCYBP20-201ENST00000524239 1129 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 CCNG2P1-201ENST00000549521 1000 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC010546.1-201ENST00000569391 485 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC009977.1-201ENST00000586015 570 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 ZNF861P-201ENST00000588126 639 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.44□□□□□ -1.86
UPF2Q9HAU5 BNIP3P33-201ENST00000598912 569 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC091805.2-201ENST00000603848 235 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC112191.3-201ENST00000604371 277 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC091965.4-201ENST00000607691 587 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AL391813.2-201ENST00000609113 322 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC006329.2-201ENST00000611491 394 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC131902.3-201ENST00000611767 581 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC095031.1-201ENST00000623685 672 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC116096.1-201ENST00000566804 2314 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 AC005832.2-201ENST00000538921 1430 ntBASIC3.44□□□□□ -1.86
UPF2Q9HAU5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPF2Q9HAU5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPF2Q9HAU5 SNORA63.1-201ENST00000362493 131 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 Y_RNA.46-201ENST00000362695 102 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 RNU6-1249P-201ENST00000363237 111 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 RNU6-851P-201ENST00000384565 107 ntBASIC3.43□□□□□ -1.86
UPF2Q9HAU5 SNORD115.1-201ENST00000391109 76 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms