Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.67□□□□□ -1.82
USP44Q9H0E7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.67□□□□□ -1.82
USP44Q9H0E7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.67□□□□□ -1.82
USP44Q9H0E7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.67□□□□□ -1.82
USP44Q9H0E7 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 MIR3682-201ENST00000581338 84 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 MIR548AB-201ENST00000584917 84 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 AC040904.1-201ENST00000590850 223 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 AL355472.4-201ENST00000610233 626 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 BX664608.1-201ENST00000610519 487 ntBASIC3.67□□□□□ -1.82
USP44Q9H0E7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP44Q9H0E7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.67□□□□□ -1.82
USP44Q9H0E7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.67□□□□□ -1.82
USP44Q9H0E7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.66□□□□□ -1.82
USP44Q9H0E7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
USP44Q9H0E7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP44Q9H0E7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP44Q9H0E7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.66□□□□□ -1.82
USP44Q9H0E7 RPL17P50-201ENST00000396131 546 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 FCF1P10-201ENST00000407590 479 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.66□□□□□ -1.82
USP44Q9H0E7 NDUFB4P7-201ENST00000423198 363 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 RPL7L1P10-201ENST00000427790 463 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.66□□□□□ -1.82
USP44Q9H0E7 SNRPEP4-201ENST00000435815 279 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 MTCO3P45-201ENST00000443036 613 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.66□□□□□ -1.82
USP44Q9H0E7 SNRPGP9-201ENST00000456025 225 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.66□□□□□ -1.82
USP44Q9H0E7 RPS23P3-201ENST00000470993 430 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.66□□□□□ -1.82
USP44Q9H0E7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
USP44Q9H0E7 GMPSP1-201ENST00000514075 579 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 AP003467.2-201ENST00000520175 319 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.66□□□□□ -1.82
USP44Q9H0E7 FAM60DP-201ENST00000524174 632 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 DEFB108A-201ENST00000530110 222 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.66□□□□□ -1.82
USP44Q9H0E7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
USP44Q9H0E7 AC135279.1-201ENST00000543493 504 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 SYF2P1-201ENST00000550658 413 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.66□□□□□ -1.82
USP44Q9H0E7 OR4H12P-201ENST00000556269 907 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.66□□□□□ -1.82
USP44Q9H0E7 CYCSP39-201ENST00000565821 309 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 MIR3186-201ENST00000577404 85 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 AC005771.1-201ENST00000585581 349 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 AC004223.2-201ENST00000590309 544 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 BNIP3P8-201ENST00000597863 560 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 AC119751.7-201ENST00000600494 245 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 AC073544.2-201ENST00000601155 540 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 AC008277.2-201ENST00000605196 797 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.66□□□□□ -1.82
USP44Q9H0E7 AC104010.1-201ENST00000616889 150 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 AC092628.2-201ENST00000622492 339 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 AC112204.3-201ENST00000623822 332 ntBASIC3.66□□□□□ -1.82
USP44Q9H0E7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.66□□□□□ -1.82
USP44Q9H0E7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
USP44Q9H0E7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
USP44Q9H0E7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
USP44Q9H0E7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.65□□□□□ -1.82
USP44Q9H0E7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
USP44Q9H0E7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
USP44Q9H0E7 SNORA36C-201ENST00000384289 132 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 MRPL42P2-201ENST00000403169 426 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 RN7SKP142-201ENST00000411236 328 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.65□□□□□ -1.83
USP44Q9H0E7 RPS15AP6-201ENST00000420703 385 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 AC018630.2-202ENST00000422992 927 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 AL356583.2-201ENST00000426536 280 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 AC008850.1-201ENST00000427546 362 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.65□□□□□ -1.83
USP44Q9H0E7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.65□□□□□ -1.83
USP44Q9H0E7 AL135938.1-201ENST00000443141 297 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 AL033528.1-201ENST00000453780 140 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 RPL21P41-201ENST00000459863 264 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 MTCO2P29-201ENST00000465212 189 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 RPS15AP36-201ENST00000492022 382 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 SNORA70.16-201ENST00000516390 95 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 AC022616.6-201ENST00000520479 119 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.65□□□□□ -1.83
USP44Q9H0E7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
USP44Q9H0E7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.65□□□□□ -1.83
USP44Q9H0E7 ZNF519P3-201ENST00000557158 1032 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 MTCYBP33-201ENST00000575007 1130 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 MIR3146-201ENST00000580367 79 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.65□□□□□ -1.83
USP44Q9H0E7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.65□□□□□ -1.83
USP44Q9H0E7 AL160281.1-201ENST00000605307 311 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.65□□□□□ -1.83
USP44Q9H0E7 uc_338.12-201ENST00000616344 181 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 FRG1KP-201ENST00000623592 341 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 AC068137.4-201ENST00000638485 296 ntBASIC3.65□□□□□ -1.83
USP44Q9H0E7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
USP44Q9H0E7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
USP44Q9H0E7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
USP44Q9H0E7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
USP44Q9H0E7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP44Q9H0E7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms