Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 MIR4714-201ENST00000580728 77 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 AC112503.2-201ENST00000609005 552 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
COL12A1Q99715 XKRY2-202ENST00000623874 1581 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 XKRY-202ENST00000624960 1581 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 RNU6-666P-201ENST00000363499 107 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 RNU4-38P-201ENST00000364472 129 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 HSPE1P1-201ENST00000421494 318 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC0.88□□□□□ -2.27
COL12A1Q99715 AC004854.1-201ENST00000440356 349 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.88□□□□□ -2.27
COL12A1Q99715 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.88□□□□□ -2.27
COL12A1Q99715 RPL7P18-201ENST00000478965 734 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 AC090897.2-201ENST00000581715 130 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 AC012443.1-201ENST00000605605 231 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 AC008962.1-201ENST00000605729 304 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.88□□□□□ -2.27
COL12A1Q99715 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.88□□□□□ -2.27
COL12A1Q99715 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
COL12A1Q99715 RNU6-17P-201ENST00000384245 107 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 RNU6-18P-201ENST00000384527 107 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 PGBD4P6-201ENST00000421501 610 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 OR6K5P-201ENST00000447050 945 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.87□□□□□ -2.27
COL12A1Q99715 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.87□□□□□ -2.27
COL12A1Q99715 HSPE1P20-201ENST00000538133 289 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 MIR4716-201ENST00000579628 84 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 AC005034.5-201ENST00000604219 466 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC0.87□□□□□ -2.27
COL12A1Q99715 ANAPC10P1-201ENST00000395991 556 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 AC244035.1-201ENST00000430042 390 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.87□□□□□ -2.27
COL12A1Q99715 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.87□□□□□ -2.27
COL12A1Q99715 RPL31P58-201ENST00000469001 379 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.87□□□□□ -2.27
COL12A1Q99715 AC087588.2-201ENST00000617667 426 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
COL12A1Q99715 CR382285.2-201ENST00000624662 1495 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
COL12A1Q99715 OR1L1-202ENST00000373686 1083 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 RNU6-1235P-201ENST00000384559 107 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 Y_RNA.549-201ENST00000384657 102 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 RPL31P63-201ENST00000422565 375 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 IFNA20P-201ENST00000436840 528 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC0.87□□□□□ -2.27
COL12A1Q99715 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.87□□□□□ -2.27
COL12A1Q99715 GDI2P2-201ENST00000445131 608 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 DPPA3P1-201ENST00000448050 469 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 AC104308.1-201ENST00000454621 333 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 RNU6-498P-201ENST00000459468 107 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC0.87□□□□□ -2.27
COL12A1Q99715 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.87□□□□□ -2.27
COL12A1Q99715 AP000254.1-201ENST00000609934 520 ntBASIC0.87□□□□□ -2.27
COL12A1Q99715 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
COL12A1Q99715 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
COL12A1Q99715 SNORA6-201ENST00000384033 151 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 MIR144-201ENST00000384886 86 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 ARL5AP2-201ENST00000444698 533 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.86□□□□□ -2.27
COL12A1Q99715 RNA5SP310-201ENST00000459084 116 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 AC096751.1-202ENST00000502691 1067 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.86□□□□□ -2.27
COL12A1Q99715 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.86□□□□□ -2.27
COL12A1Q99715 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.86□□□□□ -2.27
COL12A1Q99715 MTCO3P24-201ENST00000572729 782 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 AP003117.1-201ENST00000602771 554 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 AC097655.1-201ENST00000635075 318 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC0.86□□□□□ -2.27
COL12A1Q99715 AC114546.3-201ENST00000623582 1734 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
COL12A1Q99715 OR51A5P-201ENST00000415429 942 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 LINC01347-201ENST00000417964 355 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 MTCO1P43-201ENST00000431831 488 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.86□□□□□ -2.27
COL12A1Q99715 GTF2IP12-201ENST00000456547 356 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.86□□□□□ -2.27
COL12A1Q99715 OR6C7P-201ENST00000547875 934 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 AL158032.1-201ENST00000605401 106 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 MIR6840-201ENST00000611937 71 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 AC138915.1-201ENST00000565427 1685 ntBASIC0.86□□□□□ -2.27
COL12A1Q99715 RNU6-16P-201ENST00000384385 107 ntBASIC0.85□□□□□ -2.27
COL12A1Q99715 SSXP10-201ENST00000402595 565 ntBASIC0.85□□□□□ -2.27
COL12A1Q99715 AP000567.1-201ENST00000406413 156 ntBASIC0.85□□□□□ -2.27
COL12A1Q99715 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.85□□□□□ -2.27
COL12A1Q99715 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.85□□□□□ -2.27
COL12A1Q99715 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.85□□□□□ -2.27
COL12A1Q99715 MIR4474-201ENST00000579189 78 ntBASIC0.85□□□□□ -2.27
COL12A1Q99715 AC013244.3-201ENST00000605614 388 ntBASIC0.85□□□□□ -2.27
COL12A1Q99715 AC138473.1-201ENST00000605717 526 ntBASIC0.85□□□□□ -2.27
COL12A1Q99715 Y_RNA.132-201ENST00000363421 102 ntBASIC0.85□□□□□ -2.27
COL12A1Q99715 RNY3-201ENST00000365484 102 ntBASIC0.85□□□□□ -2.27
COL12A1Q99715 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.85□□□□□ -2.27
COL12A1Q99715 PSPHP1-201ENST00000450062 261 ntBASIC0.85□□□□□ -2.27
COL12A1Q99715 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.85□□□□□ -2.27
COL12A1Q99715 AC126177.8-201ENST00000618339 1015 ntBASIC0.85□□□□□ -2.27
COL12A1Q99715 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
COL12A1Q99715 RNU2-40P-201ENST00000410833 196 ntBASIC0.85□□□□□ -2.27
COL12A1Q99715 HMGB3P31-201ENST00000413333 595 ntBASIC0.85□□□□□ -2.27
COL12A1Q99715 SSXP9-201ENST00000417503 292 ntBASIC0.85□□□□□ -2.27
COL12A1Q99715 RPL9P9-202ENST00000466501 579 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms