Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL356057.2-201ENST00000403318 432 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 RNU2-25P-201ENST00000411041 191 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 RNA5SP508-201ENST00000411327 119 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 MTATP6P20-201ENST00000414147 562 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 AL513477.1-202ENST00000417061 214 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 AL358075.3-201ENST00000426289 226 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 AC104389.3-201ENST00000445629 235 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 FDX1P2-201ENST00000450769 375 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 BX322784.1-201ENST00000455793 1077 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 RPS3P1-201ENST00000456781 192 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 UBL5P3-201ENST00000475112 231 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 RPL23AP45-201ENST00000476406 468 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 AL135752.1-201ENST00000479477 471 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 AL049874.1-201ENST00000489560 388 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 AC147055.4-201ENST00000504399 745 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 AC024589.1-201ENST00000512207 263 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 RNA5SP216-201ENST00000516111 123 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 UBTFL10-201ENST00000528532 562 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 AC087241.2-201ENST00000535801 324 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 AL645944.1-201ENST00000603857 493 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 AC140725.3-201ENST00000616193 880 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 MIR7843-201ENST00000622274 79 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 OR4G2P-202ENST00000641004 1759 ntBASIC2.3□□□□□ -2.04
COL21A1Q96P44 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.3□□□□□ -2.04
COL21A1Q96P44 AL359693.1-201ENST00000614959 2407 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 CR848007.1-201ENST00000442354 1699 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
COL21A1Q96P44 RNU5E-8P-201ENST00000363502 116 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 RNU6-270P-201ENST00000364131 105 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 SNORA80E-201ENST00000384744 137 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
COL21A1Q96P44 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 AL953862.1-201ENST00000423016 168 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 AC098614.2-201ENST00000426040 255 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COL21A1Q96P44 AC002381.1-201ENST00000447049 280 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 MTND2P39-201ENST00000457230 764 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 AC126389.1-201ENST00000477436 290 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 RPS27P26-201ENST00000494583 239 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 MTND3P3-201ENST00000505004 126 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 AC096571.1-202ENST00000506634 735 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 AC079395.1-201ENST00000510981 262 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 AC113155.1-201ENST00000511141 769 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 OR5BM1P-201ENST00000512021 366 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 RPPH1-2P-201ENST00000516688 293 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 RNU6-840P-201ENST00000517275 65 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
COL21A1Q96P44 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
COL21A1Q96P44 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 YWHAZP1-201ENST00000556286 722 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 CYCSP2-201ENST00000558168 301 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 AC009712.1-201ENST00000564938 316 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 AC234778.2-201ENST00000566241 354 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 MIR5194-201ENST00000582634 120 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 MIR4769-201ENST00000584126 77 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 NRBF2P5-201ENST00000603087 788 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 AC026790.2-201ENST00000606282 430 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 AC087241.4-201ENST00000612441 480 ntBASIC2.29□□□□□ -2.04
COL21A1Q96P44 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.29□□□□□ -2.04
COL21A1Q96P44 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.28□□□□□ -2.04
COL21A1Q96P44 AC099786.3-201ENST00000565735 1410 ntBASIC2.28□□□□□ -2.04
COL21A1Q96P44 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL21A1Q96P44 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.28□□□□□ -2.04
COL21A1Q96P44 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
COL21A1Q96P44 RNU6-217P-201ENST00000384164 104 ntBASIC2.28□□□□□ -2.04
COL21A1Q96P44 RNU6-1207P-201ENST00000384343 107 ntBASIC2.28□□□□□ -2.04
COL21A1Q96P44 RNU6-1176P-201ENST00000390955 107 ntBASIC2.28□□□□□ -2.04
COL21A1Q96P44 AL590084.2-201ENST00000401481 382 ntBASIC2.28□□□□□ -2.04
COL21A1Q96P44 MIR1284-201ENST00000408337 120 ntBASIC2.28□□□□□ -2.04
COL21A1Q96P44 U3.37-201ENST00000408528 213 ntBASIC2.28□□□□□ -2.04
COL21A1Q96P44 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms