Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RNU4-31P-201ENST00000384211 141 ntBASIC0.98□□□□□ -2.25
CFAP54Q96N23 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.98□□□□□ -2.25
CFAP54Q96N23 PGBD4P6-201ENST00000421501 610 ntBASIC0.98□□□□□ -2.25
CFAP54Q96N23 AC092832.1-201ENST00000422934 400 ntBASIC0.98□□□□□ -2.25
CFAP54Q96N23 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.98□□□□□ -2.25
CFAP54Q96N23 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.98□□□□□ -2.25
CFAP54Q96N23 AP003117.1-201ENST00000602771 554 ntBASIC0.98□□□□□ -2.25
CFAP54Q96N23 MIR1265-201ENST00000408444 86 ntBASIC0.98□□□□□ -2.25
CFAP54Q96N23 HMGB3P31-201ENST00000413333 595 ntBASIC0.98□□□□□ -2.25
CFAP54Q96N23 RPS29P23-201ENST00000458635 123 ntBASIC0.98□□□□□ -2.25
CFAP54Q96N23 RPL9P9-202ENST00000466501 579 ntBASIC0.98□□□□□ -2.25
CFAP54Q96N23 AC074029.2-201ENST00000551045 634 ntBASIC0.98□□□□□ -2.25
CFAP54Q96N23 MTCO1P40-201ENST00000574371 625 ntBASIC0.98□□□□□ -2.25
CFAP54Q96N23 AC090897.2-201ENST00000581715 130 ntBASIC0.98□□□□□ -2.25
CFAP54Q96N23 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CFAP54Q96N23 RNU6-288P-201ENST00000363690 104 ntBASIC0.97□□□□□ -2.25
CFAP54Q96N23 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.97□□□□□ -2.25
CFAP54Q96N23 MIR1912-201ENST00000410389 80 ntBASIC0.97□□□□□ -2.25
CFAP54Q96N23 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.97□□□□□ -2.25
CFAP54Q96N23 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.97□□□□□ -2.25
CFAP54Q96N23 AC083899.3-201ENST00000603413 594 ntBASIC0.97□□□□□ -2.25
CFAP54Q96N23 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC0.97□□□□□ -2.25
CFAP54Q96N23 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.97□□□□□ -2.25
CFAP54Q96N23 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.97□□□□□ -2.25
CFAP54Q96N23 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC0.97□□□□□ -2.25
CFAP54Q96N23 AC025918.2-201ENST00000558683 763 ntBASIC0.97□□□□□ -2.25
CFAP54Q96N23 AL133393.1-201ENST00000603277 287 ntBASIC0.97□□□□□ -2.25
CFAP54Q96N23 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CFAP54Q96N23 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.97□□□□□ -2.25
CFAP54Q96N23 RNU6-16P-201ENST00000384385 107 ntBASIC0.97□□□□□ -2.25
CFAP54Q96N23 AC092451.1-201ENST00000480211 153 ntBASIC0.97□□□□□ -2.25
CFAP54Q96N23 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.97□□□□□ -2.25
CFAP54Q96N23 AC068446.3-201ENST00000555285 382 ntBASIC0.97□□□□□ -2.25
CFAP54Q96N23 AC146944.4-201ENST00000602697 718 ntBASIC0.97□□□□□ -2.25
CFAP54Q96N23 MIR6759-201ENST00000638110 65 ntBASIC0.97□□□□□ -2.25
CFAP54Q96N23 Y_RNA.324-201ENST00000365165 102 ntBASIC0.96□□□□□ -2.26
CFAP54Q96N23 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.96□□□□□ -2.26
CFAP54Q96N23 AC012170.1-201ENST00000495139 359 ntBASIC0.96□□□□□ -2.26
CFAP54Q96N23 MIR5589-201ENST00000579442 60 ntBASIC0.96□□□□□ -2.26
CFAP54Q96N23 AC091057.2-201ENST00000602594 792 ntBASIC0.96□□□□□ -2.26
CFAP54Q96N23 AC004943.3-201ENST00000624116 600 ntBASIC0.96□□□□□ -2.26
CFAP54Q96N23 RNU6-178P-201ENST00000384631 104 ntBASIC0.96□□□□□ -2.26
CFAP54Q96N23 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.96□□□□□ -2.26
CFAP54Q96N23 RNA5SP310-201ENST00000459084 116 ntBASIC0.96□□□□□ -2.26
CFAP54Q96N23 RPL7P18-201ENST00000478965 734 ntBASIC0.96□□□□□ -2.26
CFAP54Q96N23 BOLA3P3-201ENST00000505182 232 ntBASIC0.96□□□□□ -2.26
CFAP54Q96N23 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.96□□□□□ -2.26
CFAP54Q96N23 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.96□□□□□ -2.26
CFAP54Q96N23 HSPE1P14-201ENST00000605812 302 ntBASIC0.96□□□□□ -2.26
CFAP54Q96N23 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CFAP54Q96N23 MIR409-201ENST00000362237 79 ntBASIC0.95□□□□□ -2.26
CFAP54Q96N23 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.95□□□□□ -2.26
CFAP54Q96N23 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.95□□□□□ -2.26
CFAP54Q96N23 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC0.95□□□□□ -2.26
CFAP54Q96N23 AC103710.2-202ENST00000641454 2853 ntBASIC0.95□□□□□ -2.26
CFAP54Q96N23 MIR150-201ENST00000385048 84 ntBASIC0.95□□□□□ -2.26
CFAP54Q96N23 Z75741.2-201ENST00000417272 1167 ntBASIC0.95□□□□□ -2.26
CFAP54Q96N23 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.95□□□□□ -2.26
CFAP54Q96N23 MORF4L1P7-201ENST00000426038 703 ntBASIC0.95□□□□□ -2.26
CFAP54Q96N23 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.95□□□□□ -2.26
CFAP54Q96N23 AC114322.1-201ENST00000506771 926 ntBASIC0.95□□□□□ -2.26
CFAP54Q96N23 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.95□□□□□ -2.26
CFAP54Q96N23 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.95□□□□□ -2.26
CFAP54Q96N23 AC096751.1-202ENST00000502691 1067 ntBASIC0.95□□□□□ -2.26
CFAP54Q96N23 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.95□□□□□ -2.26
CFAP54Q96N23 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.95□□□□□ -2.26
CFAP54Q96N23 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CFAP54Q96N23 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
CFAP54Q96N23 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
CFAP54Q96N23 RPL31P63-201ENST00000422565 375 ntBASIC0.94□□□□□ -2.26
CFAP54Q96N23 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC0.94□□□□□ -2.26
CFAP54Q96N23 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.94□□□□□ -2.26
CFAP54Q96N23 AC112503.2-201ENST00000609005 552 ntBASIC0.94□□□□□ -2.26
CFAP54Q96N23 Xist_exon1.1-201ENST00000618930 85 ntBASIC0.94□□□□□ -2.26
CFAP54Q96N23 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
CFAP54Q96N23 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.94□□□□□ -2.26
CFAP54Q96N23 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
CFAP54Q96N23 RNU6-234P-201ENST00000365229 104 ntBASIC0.94□□□□□ -2.26
CFAP54Q96N23 HSPE1P26-201ENST00000405341 275 ntBASIC0.94□□□□□ -2.26
CFAP54Q96N23 GDI2P2-201ENST00000445131 608 ntBASIC0.94□□□□□ -2.26
CFAP54Q96N23 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.94□□□□□ -2.26
CFAP54Q96N23 HMGB3P30-201ENST00000457863 606 ntBASIC0.94□□□□□ -2.26
CFAP54Q96N23 AC087465.1-201ENST00000560574 245 ntBASIC0.94□□□□□ -2.26
CFAP54Q96N23 AC002550.2-201ENST00000621246 394 ntBASIC0.94□□□□□ -2.26
CFAP54Q96N23 Z69720.2-201ENST00000624755 279 ntBASIC0.94□□□□□ -2.26
CFAP54Q96N23 MIR203B-201ENST00000636080 86 ntBASIC0.94□□□□□ -2.26
CFAP54Q96N23 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CFAP54Q96N23 ANAPC10P1-201ENST00000395991 556 ntBASIC0.93□□□□□ -2.26
CFAP54Q96N23 LINC01347-201ENST00000417964 355 ntBASIC0.93□□□□□ -2.26
CFAP54Q96N23 GTF2IP12-201ENST00000456547 356 ntBASIC0.93□□□□□ -2.26
CFAP54Q96N23 ATG12P2-201ENST00000456830 416 ntBASIC0.93□□□□□ -2.26
CFAP54Q96N23 AC067942.3-201ENST00000512025 362 ntBASIC0.93□□□□□ -2.26
CFAP54Q96N23 MIR4636-201ENST00000582271 80 ntBASIC0.93□□□□□ -2.26
CFAP54Q96N23 AC011468.4-201ENST00000603942 409 ntBASIC0.93□□□□□ -2.26
CFAP54Q96N23 OR5AQ1P-202ENST00000641257 1534 ntBASIC0.93□□□□□ -2.26
CFAP54Q96N23 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CFAP54Q96N23 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CFAP54Q96N23 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC0.93□□□□□ -2.26
CFAP54Q96N23 RPS20P10-201ENST00000451209 253 ntBASIC0.93□□□□□ -2.26
CFAP54Q96N23 AP005597.4-201ENST00000526762 229 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms