Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 AL591926.4-201ENST00000616895 298 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM47Q96LD4 AC097461.1-201ENST00000568928 2821 ntBASIC5.8□□□□□ -1.48
TRIM47Q96LD4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 SNORD113-8-201ENST00000363497 74 ntBASIC5.79□□□□□ -1.48
TRIM47Q96LD4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 RNU6-317P-201ENST00000384031 107 ntBASIC5.79□□□□□ -1.48
TRIM47Q96LD4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 AC004975.1-201ENST00000428733 208 ntBASIC5.79□□□□□ -1.48
TRIM47Q96LD4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 ISCUP1-201ENST00000454451 448 ntBASIC5.79□□□□□ -1.48
TRIM47Q96LD4 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 AC005798.1-201ENST00000513715 387 ntBASIC5.79□□□□□ -1.48
TRIM47Q96LD4 RNU6-496P-201ENST00000516145 99 ntBASIC5.79□□□□□ -1.48
TRIM47Q96LD4 RN7SKP276-201ENST00000516242 268 ntBASIC5.79□□□□□ -1.48
TRIM47Q96LD4 AC006349.1-201ENST00000555526 235 ntBASIC5.79□□□□□ -1.48
TRIM47Q96LD4 AC009127.3-201ENST00000570531 403 ntBASIC5.79□□□□□ -1.48
TRIM47Q96LD4 RN7SL690P-201ENST00000582087 240 ntBASIC5.79□□□□□ -1.48
TRIM47Q96LD4 IGHVIII-44-202ENST00000636235 289 ntBASIC5.79□□□□□ -1.48
TRIM47Q96LD4 AC004817.4-201ENST00000602396 3625 ntBASIC5.79□□□□□ -1.48
TRIM47Q96LD4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 CASC19-204ENST00000641001 2055 ntBASIC5.79□□□□□ -1.48
TRIM47Q96LD4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 AC110774.1-201ENST00000623567 2018 ntBASIC5.79□□□□□ -1.48
TRIM47Q96LD4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM47Q96LD4 AC099654.2-201ENST00000433031 1980 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 AC007785.2-201ENST00000598627 1916 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 Y_RNA.218-201ENST00000364218 104 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 Y_RNA.435-201ENST00000384095 112 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 MIR186-201ENST00000384988 86 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 RNU6-651P-201ENST00000411040 105 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 AC234779.1-201ENST00000425910 285 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 TBCAP1-201ENST00000436520 327 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 AL354714.3-201ENST00000447284 493 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 PPIAP21-201ENST00000464473 501 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 ENPP7P11-201ENST00000505915 627 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 Y_RNA.679-201ENST00000516416 91 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 RNU6-64P-201ENST00000517119 105 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 AP000859.1-201ENST00000525536 307 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 AL158827.2-201ENST00000602494 330 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 AC068724.3-201ENST00000625906 87 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 AL691447.3-201ENST00000635020 330 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 U6.92-201ENST00000636464 89 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 AC139713.2-214ENST00000642059 1811 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.78□□□□□ -1.48
TRIM47Q96LD4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
TRIM47Q96LD4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
TRIM47Q96LD4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
TRIM47Q96LD4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM47Q96LD4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM47Q96LD4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM47Q96LD4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM47Q96LD4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM47Q96LD4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM47Q96LD4 RNA5SP267-201ENST00000364893 126 ntBASIC5.77□□□□□ -1.49
TRIM47Q96LD4 SNORD116-14-201ENST00000383894 92 ntBASIC5.77□□□□□ -1.49
TRIM47Q96LD4 SNORD116-17-201ENST00000383929 92 ntBASIC5.77□□□□□ -1.49
TRIM47Q96LD4 RNU1-74P-201ENST00000384108 171 ntBASIC5.77□□□□□ -1.49
TRIM47Q96LD4 SNORD116-15-201ENST00000384445 92 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms