Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.71□□□□□ -1.98
USP47Q96K76 AC007742.1-201ENST00000425789 329 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 MTND2P5-201ENST00000432656 1006 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 AC092573.2-201ENST00000434546 243 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 ELOCP26-201ENST00000436067 329 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 PTGES3P1-201ENST00000439531 483 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 MTCYBP11-201ENST00000447254 1109 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 SNRPGP6-201ENST00000451124 220 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 OFD1P3Y-201ENST00000453312 783 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.71□□□□□ -1.98
USP47Q96K76 RNU6-56P-201ENST00000516986 93 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.71□□□□□ -1.98
USP47Q96K76 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.71□□□□□ -1.98
USP47Q96K76 COX6CP5-201ENST00000527162 228 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 NDUFS5P6-201ENST00000529136 295 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.71□□□□□ -1.98
USP47Q96K76 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.71□□□□□ -1.98
USP47Q96K76 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.71□□□□□ -1.98
USP47Q96K76 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.71□□□□□ -1.98
USP47Q96K76 AC125611.1-201ENST00000549563 229 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 AC023043.2-201ENST00000589678 1026 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.71□□□□□ -1.98
USP47Q96K76 BNIP3P8-201ENST00000597863 560 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 NUTF2P8-201ENST00000604593 363 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 AL512427.1-201ENST00000618593 349 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 AC006249.1-201ENST00000621223 471 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.71□□□□□ -1.98
USP47Q96K76 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
USP47Q96K76 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.7□□□□□ -1.98
USP47Q96K76 RNU6-216P-201ENST00000363282 104 ntBASIC2.7□□□□□ -1.98
USP47Q96K76 AL356131.1-201ENST00000405826 414 ntBASIC2.7□□□□□ -1.98
USP47Q96K76 RPL27AP8-201ENST00000424277 446 ntBASIC2.7□□□□□ -1.98
USP47Q96K76 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.7□□□□□ -1.98
USP47Q96K76 AL121871.1-201ENST00000443413 436 ntBASIC2.7□□□□□ -1.98
USP47Q96K76 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.7□□□□□ -1.98
USP47Q96K76 AL592447.1-201ENST00000447592 540 ntBASIC2.7□□□□□ -1.98
USP47Q96K76 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.7□□□□□ -1.98
USP47Q96K76 AC090255.1-201ENST00000495779 349 ntBASIC2.7□□□□□ -1.98
USP47Q96K76 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.7□□□□□ -1.98
USP47Q96K76 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.7□□□□□ -1.98
USP47Q96K76 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.7□□□□□ -1.98
USP47Q96K76 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.7□□□□□ -1.98
USP47Q96K76 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.7□□□□□ -1.98
USP47Q96K76 RNU6-1053P-201ENST00000515930 101 ntBASIC2.7□□□□□ -1.98
USP47Q96K76 SCARNA17.1-201ENST00000516211 143 ntBASIC2.7□□□□□ -1.98
USP47Q96K76 SCARNA17.2-201ENST00000516334 143 ntBASIC2.7□□□□□ -1.98
USP47Q96K76 RPL21P136-201ENST00000605378 396 ntBASIC2.7□□□□□ -1.98
USP47Q96K76 AP002802.2-201ENST00000605877 235 ntBASIC2.7□□□□□ -1.98
USP47Q96K76 SCARNA17.4-201ENST00000614296 143 ntBASIC2.7□□□□□ -1.98
USP47Q96K76 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.69□□□□□ -1.98
USP47Q96K76 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
USP47Q96K76 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
USP47Q96K76 DEFB108F-201ENST00000344638 222 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 RNA5SP138-201ENST00000365098 114 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 RNU6-1027P-201ENST00000383998 107 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
USP47Q96K76 AC019129.1-201ENST00000403786 261 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 AL450338.1-201ENST00000407987 512 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 RNU2-43P-201ENST00000410306 190 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.69□□□□□ -1.98
USP47Q96K76 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 NDUFB4P6-201ENST00000436819 366 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
USP47Q96K76 RPL23AP20-201ENST00000447965 421 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 AC026410.2-201ENST00000460281 156 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 AC007182.2-201ENST00000489251 402 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 RPS29P11-201ENST00000496507 171 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.69□□□□□ -1.98
USP47Q96K76 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
USP47Q96K76 RN7SKP31-201ENST00000516354 278 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 CASP1P1-201ENST00000526345 212 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 DEFB108D-201ENST00000527787 222 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.69□□□□□ -1.98
USP47Q96K76 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.69□□□□□ -1.98
USP47Q96K76 AC110588.1-201ENST00000559699 137 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 AC011260.1-201ENST00000578420 472 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 DUXAP11-201ENST00000603858 526 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 AC011890.2-201ENST00000613393 294 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 AC084824.4-201ENST00000620106 731 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.69□□□□□ -1.98
USP47Q96K76 AC027309.3-201ENST00000623419 351 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.69□□□□□ -1.98
USP47Q96K76 AC107982.1-201ENST00000507171 1300 ntBASIC2.69□□□□□ -1.98
USP47Q96K76 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP47Q96K76 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
USP47Q96K76 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP47Q96K76 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.68□□□□□ -1.98
USP47Q96K76 RNU6-1197P-201ENST00000391183 107 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 RNU2-20P-201ENST00000410425 191 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.68□□□□□ -1.98
USP47Q96K76 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.68□□□□□ -1.98
USP47Q96K76 AL031659.1-201ENST00000447075 539 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 PNPLA4P1-201ENST00000458328 305 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 RPS15AP17-201ENST00000470598 390 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 AC090453.1-201ENST00000495560 436 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 TMEM251P1-201ENST00000503717 318 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
USP47Q96K76 AC114322.1-201ENST00000506771 926 ntBASIC2.68□□□□□ -1.98
USP47Q96K76 AC113420.1-201ENST00000507903 571 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms