Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RNU6-897P-201ENST00000517135 105 ntBASIC5.19□□□□□ -1.58
IFT43Q96FT9 RNU6-111P-201ENST00000517179 105 ntBASIC5.19□□□□□ -1.58
IFT43Q96FT9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 AC090517.1-201ENST00000569307 266 ntBASIC5.19□□□□□ -1.58
IFT43Q96FT9 CPDP1-201ENST00000579660 283 ntBASIC5.19□□□□□ -1.58
IFT43Q96FT9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 RPS29P30-201ENST00000600975 111 ntBASIC5.19□□□□□ -1.58
IFT43Q96FT9 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
IFT43Q96FT9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
IFT43Q96FT9 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 Z99571.1-201ENST00000636677 394 ntBASIC5.19□□□□□ -1.58
IFT43Q96FT9 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
IFT43Q96FT9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
IFT43Q96FT9 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.18□□□□□ -1.58
IFT43Q96FT9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
IFT43Q96FT9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
IFT43Q96FT9 SAMMSON-213ENST00000641336 1521 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
IFT43Q96FT9 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
IFT43Q96FT9 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
IFT43Q96FT9 UBE2L2-201ENST00000254302 429 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 SNURFL-201ENST00000309296 343 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
IFT43Q96FT9 RPL37P18-201ENST00000411602 243 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 AF186996.5-201ENST00000418098 904 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 MTATP6P4-201ENST00000427725 675 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 COX6CP13-201ENST00000428703 226 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 AL592045.1-201ENST00000429867 352 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.18□□□□□ -1.58
IFT43Q96FT9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.18□□□□□ -1.58
IFT43Q96FT9 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.18□□□□□ -1.58
IFT43Q96FT9 AC006466.1-201ENST00000438721 289 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.18□□□□□ -1.58
IFT43Q96FT9 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.18□□□□□ -1.58
IFT43Q96FT9 AL392103.1-201ENST00000447000 198 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 RNU7-169P-201ENST00000459456 61 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 AC087588.1-201ENST00000462203 316 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
IFT43Q96FT9 AC004980.4-201ENST00000513375 203 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
IFT43Q96FT9 AP003733.2-201ENST00000529409 171 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 AL121603.1-201ENST00000553815 142 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 EDDM3DP-201ENST00000554692 434 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
IFT43Q96FT9 MIR1273C-201ENST00000578669 77 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 AL390123.1-201ENST00000603216 237 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 MIR3976-201ENST00000606807 139 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 AL353748.2-201ENST00000622148 471 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
IFT43Q96FT9 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
IFT43Q96FT9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
IFT43Q96FT9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
IFT43Q96FT9 AC090971.4-201ENST00000560291 1800 ntBASIC5.18□□□□□ -1.58
IFT43Q96FT9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
IFT43Q96FT9 AL157777.2-201ENST00000258070 137 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 Y_RNA.20-201ENST00000362479 113 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 SNORA2.3-201ENST00000383920 135 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 SAR1AP2-201ENST00000392696 594 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 AL591034.2-201ENST00000402839 359 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 MIR548H3-201ENST00000408771 118 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 AL359073.1-201ENST00000448036 403 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 HMGB3P16-201ENST00000508037 287 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 NDUFB4P9-201ENST00000511646 388 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 RNU6-397P-201ENST00000516226 104 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 RN7SKP260-201ENST00000516907 149 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 RNU6-143P-201ENST00000516942 93 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 RNU6-570P-201ENST00000517051 105 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 BNIP3P1-201ENST00000547295 580 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 MIR4436B2-201ENST00000581415 91 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 MIR4436B1-201ENST00000583272 91 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 AC006023.2-201ENST00000609916 167 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 AC064801.1-201ENST00000612025 407 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 RMST_4.1-201ENST00000616886 107 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 AC091905.4-201ENST00000623432 202 ntBASIC5.17□□□□□ -1.58
IFT43Q96FT9 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms