Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.17□□□□□ -2.06
TOPBP1Q92547 RPS26P56-201ENST00000444468 240 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 Z96811.1-201ENST00000445880 108 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 AC092685.1-201ENST00000447960 1243 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 RPS23P3-201ENST00000470993 430 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 AC023424.2-201ENST00000493479 777 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 AC093767.1-201ENST00000504523 156 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 AC093281.2-201ENST00000510153 597 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.17□□□□□ -2.06
TOPBP1Q92547 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.17□□□□□ -2.06
TOPBP1Q92547 AC022634.1-201ENST00000520765 532 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.17□□□□□ -2.06
TOPBP1Q92547 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.17□□□□□ -2.06
TOPBP1Q92547 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.17□□□□□ -2.06
TOPBP1Q92547 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.17□□□□□ -2.06
TOPBP1Q92547 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TOPBP1Q92547 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TOPBP1Q92547 DSTNP4-201ENST00000399472 474 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 AL033519.2-201ENST00000403958 392 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 Z86062.1-201ENST00000406773 777 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.17□□□□□ -2.06
TOPBP1Q92547 MTATP6P4-201ENST00000427725 675 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 LSM1P1-201ENST00000438629 273 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 snoU13.4-201ENST00000458916 104 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 RNF138P1-201ENST00000502765 546 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 ARL2BPP4-201ENST00000506854 471 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 FABP5P5-201ENST00000515537 406 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 HMGB1P46-201ENST00000520062 610 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 AC022690.1-201ENST00000526681 550 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.17□□□□□ -2.06
TOPBP1Q92547 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.17□□□□□ -2.06
TOPBP1Q92547 AC109446.2-201ENST00000567872 497 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.17□□□□□ -2.06
TOPBP1Q92547 AC022387.2-201ENST00000604050 448 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 AC018618.2-201ENST00000604770 446 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 AC008962.1-201ENST00000605729 304 ntBASIC2.17□□□□□ -2.06
TOPBP1Q92547 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TOPBP1Q92547 SNORD56.5-201ENST00000364281 72 ntBASIC2.16□□□□□ -2.06
TOPBP1Q92547 RPS6P14-201ENST00000425165 719 ntBASIC2.16□□□□□ -2.06
TOPBP1Q92547 AC006548.1-201ENST00000427470 102 ntBASIC2.16□□□□□ -2.06
TOPBP1Q92547 MTCO1P57-201ENST00000432182 261 ntBASIC2.16□□□□□ -2.06
TOPBP1Q92547 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.16□□□□□ -2.06
TOPBP1Q92547 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.16□□□□□ -2.06
TOPBP1Q92547 AC008837.2-201ENST00000513076 418 ntBASIC2.16□□□□□ -2.06
TOPBP1Q92547 SNORA31.13-201ENST00000516624 135 ntBASIC2.16□□□□□ -2.06
TOPBP1Q92547 CIR1P1-201ENST00000524055 1133 ntBASIC2.16□□□□□ -2.06
TOPBP1Q92547 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.16□□□□□ -2.06
TOPBP1Q92547 AP000676.4-201ENST00000624659 623 ntBASIC2.16□□□□□ -2.06
TOPBP1Q92547 CR381572.1-201ENST00000625098 102 ntBASIC2.16□□□□□ -2.06
TOPBP1Q92547 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.16□□□□□ -2.06
TOPBP1Q92547 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
TOPBP1Q92547 RNU4-52P-201ENST00000384209 138 ntBASIC2.15□□□□□ -2.07
TOPBP1Q92547 LINC01347-201ENST00000417964 355 ntBASIC2.15□□□□□ -2.07
TOPBP1Q92547 RPL36P19-201ENST00000430744 301 ntBASIC2.15□□□□□ -2.07
TOPBP1Q92547 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.15□□□□□ -2.07
TOPBP1Q92547 AC097499.1-201ENST00000444277 208 ntBASIC2.15□□□□□ -2.07
TOPBP1Q92547 AC008427.1-201ENST00000503102 655 ntBASIC2.15□□□□□ -2.07
TOPBP1Q92547 SUMO2P6-201ENST00000505273 288 ntBASIC2.15□□□□□ -2.07
TOPBP1Q92547 AC008676.3-201ENST00000521237 435 ntBASIC2.15□□□□□ -2.07
TOPBP1Q92547 HAUS1P3-201ENST00000523909 662 ntBASIC2.15□□□□□ -2.07
TOPBP1Q92547 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.15□□□□□ -2.07
TOPBP1Q92547 NOP56P3-201ENST00000549457 385 ntBASIC2.15□□□□□ -2.07
TOPBP1Q92547 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.15□□□□□ -2.07
TOPBP1Q92547 AC087481.2-201ENST00000565492 330 ntBASIC2.15□□□□□ -2.07
TOPBP1Q92547 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.15□□□□□ -2.07
TOPBP1Q92547 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.15□□□□□ -2.07
TOPBP1Q92547 XIAPP1-201ENST00000603162 600 ntBASIC2.15□□□□□ -2.07
TOPBP1Q92547 AC016727.2-201ENST00000603988 621 ntBASIC2.15□□□□□ -2.07
TOPBP1Q92547 AP005137.2-201ENST00000609238 400 ntBASIC2.15□□□□□ -2.07
TOPBP1Q92547 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.15□□□□□ -2.07
TOPBP1Q92547 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.15□□□□□ -2.07
TOPBP1Q92547 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TOPBP1Q92547 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TOPBP1Q92547 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.15□□□□□ -2.07
TOPBP1Q92547 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.14□□□□□ -2.07
TOPBP1Q92547 RNU4-41P-201ENST00000364426 143 ntBASIC2.14□□□□□ -2.07
TOPBP1Q92547 CD24P4-201ENST00000382840 243 ntBASIC2.14□□□□□ -2.07
TOPBP1Q92547 FO393413.1-201ENST00000402892 195 ntBASIC2.14□□□□□ -2.07
TOPBP1Q92547 RNU2-25P-201ENST00000411041 191 ntBASIC2.14□□□□□ -2.07
TOPBP1Q92547 UBE2D3P2-201ENST00000424409 445 ntBASIC2.14□□□□□ -2.07
TOPBP1Q92547 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.14□□□□□ -2.07
TOPBP1Q92547 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.14□□□□□ -2.07
TOPBP1Q92547 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.14□□□□□ -2.07
TOPBP1Q92547 AC113155.1-201ENST00000511141 769 ntBASIC2.14□□□□□ -2.07
TOPBP1Q92547 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.14□□□□□ -2.07
TOPBP1Q92547 SNORA31.8-201ENST00000516327 108 ntBASIC2.14□□□□□ -2.07
TOPBP1Q92547 RNA5SP61-201ENST00000516453 100 ntBASIC2.14□□□□□ -2.07
TOPBP1Q92547 AC025755.1-201ENST00000521306 278 ntBASIC2.14□□□□□ -2.07
TOPBP1Q92547 ERHP1-201ENST00000523006 310 ntBASIC2.14□□□□□ -2.07
TOPBP1Q92547 AC068338.1-201ENST00000565567 176 ntBASIC2.14□□□□□ -2.07
TOPBP1Q92547 AC242628.1-201ENST00000606810 391 ntBASIC2.14□□□□□ -2.07
TOPBP1Q92547 AL355810.1-201ENST00000614629 552 ntBASIC2.14□□□□□ -2.07
TOPBP1Q92547 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TOPBP1Q92547 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
TOPBP1Q92547 RNU6-1249P-201ENST00000363237 111 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 RNU6-461P-201ENST00000364195 107 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 SNORA14A-201ENST00000364773 135 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 RNU6-203P-201ENST00000384038 104 ntBASIC2.13□□□□□ -2.07
TOPBP1Q92547 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
TOPBP1Q92547 RNA5SP56-201ENST00000410277 118 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms