Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AP001992.1-205ENST00000462248 379 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 AP001086.1-201ENST00000494882 321 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 Y_RNA.662-201ENST00000516028 97 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 RNU6-513P-201ENST00000516104 104 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 RPL23AP84-201ENST00000571193 464 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 AL359547.2-201ENST00000615810 418 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 U6.106-201ENST00000636360 105 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.43□□□□□ -1.54
NEDD1Q8NHV4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 AC138393.1-203ENST00000327086 343 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 Y_RNA.458-201ENST00000384240 102 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 MIR659-201ENST00000384963 97 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 RNU6-1135P-201ENST00000411083 103 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 AL035461.1-201ENST00000421490 332 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 RPS12P5-201ENST00000423449 371 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 AC010154.1-201ENST00000425857 269 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 ISCUP1-201ENST00000454451 448 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 RN7SL481P-201ENST00000477764 299 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 SCARNA24.2-201ENST00000516968 130 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 SOD1P3-201ENST00000518682 454 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 MIR4293-201ENST00000584305 78 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 ELOCP5-201ENST00000604924 333 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 CYP3A51P-201ENST00000633513 256 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 RLIMP1-201ENST00000339626 1680 ntBASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NEDD1Q8NHV4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 HAUS6P2-201ENST00000433254 2404 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 RNU5B-2P-201ENST00000363036 113 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 Y_RNA.240-201ENST00000364469 95 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 RNU6-715P-201ENST00000365204 103 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 RNY4P28-201ENST00000365281 93 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 Y_RNA.353-201ENST00000365440 108 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 Y_RNA.418-201ENST00000384029 102 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 RNU6-417P-201ENST00000384712 107 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 MIR625-201ENST00000385047 85 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 SNORA53-201ENST00000391141 249 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 ELOCP19-201ENST00000411919 318 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AC016397.1-201ENST00000412463 242 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 RNU7-59P-201ENST00000459101 61 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AC087477.1-201ENST00000465747 340 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AC020890.1-201ENST00000491837 504 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 RPS27P26-201ENST00000494583 239 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AC093853.1-201ENST00000515689 483 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 RNU6-911P-201ENST00000516523 104 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 Y_RNA.687-201ENST00000516558 91 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 RNU6-1092P-201ENST00000516955 87 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 RNU6-64P-201ENST00000517119 105 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AC144568.1-201ENST00000520139 137 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 CYCSP27-201ENST00000527643 293 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 MRPS18CP4-201ENST00000535821 231 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AL133153.1-201ENST00000557756 303 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 SULT1C2P2-201ENST00000562517 294 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AC090615.1-201ENST00000577519 154 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 MIR4300-201ENST00000581016 96 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AC007619.2-201ENST00000605743 379 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 AC034102.8-201ENST00000615146 484 ntBASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 BX322639.1-202ENST00000423987 2213 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms