Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 Y_RNA.151-201ENST00000363566 112 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 Y_RNA.324-201ENST00000365165 102 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 Y_RNA.428-201ENST00000384078 102 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 MIR517A-201ENST00000385001 87 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AL445529.1-201ENST00000398713 389 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 RNU4-6P-201ENST00000410804 122 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AL356867.1-201ENST00000429623 299 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 IPO7P1-201ENST00000442031 636 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 H2AFZP6-201ENST00000444403 394 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 RANP8-201ENST00000444720 713 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 PCMTD1P1-201ENST00000455560 355 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 RPL12P25-201ENST00000455592 494 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AP000942.1-201ENST00000463969 747 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 RNU6-764P-201ENST00000516396 105 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 SNORD116.3-201ENST00000517176 78 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AP000827.1-201ENST00000527814 258 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AP001781.1-201ENST00000530977 207 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AC084783.1-201ENST00000565846 910 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AC209154.1-201ENST00000582156 337 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 MIR5096-201ENST00000583713 70 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AL161798.1-201ENST00000604630 131 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AP002826.1-201ENST00000608835 315 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 MIR6748-201ENST00000610433 71 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 MIR8069-1-201ENST00000616627 86 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 MIR8069-2-201ENST00000621412 86 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 AC107068.1-201ENST00000563286 4218 ntBASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.37□□□□□ -1.71
ARHGEF39Q8N4T4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 Y_RNA.33-201ENST00000362591 102 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 RN7SKP115-201ENST00000363177 317 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 RNU6-395P-201ENST00000365662 106 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 RNY1P14-201ENST00000384426 108 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 SDHCP2-201ENST00000398565 501 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 CYCSP33-201ENST00000414485 327 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 NOTCH2P1-201ENST00000443481 624 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 ARL2BPP10-201ENST00000446487 531 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 snoU13.4-201ENST00000458916 104 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 AC008571.1-201ENST00000467232 300 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 RN7SL459P-201ENST00000481078 302 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 CEACAMP10-202ENST00000495431 496 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 SCARNA15.2-201ENST00000516409 127 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 RNA5SP384-201ENST00000516615 116 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 ATP5F1P5-201ENST00000526403 760 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 AL117187.1-201ENST00000555482 181 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 AL157871.3-201ENST00000557231 293 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 MED28P6-201ENST00000558776 231 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 RN7SL52P-201ENST00000584271 284 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 AC010205.1-201ENST00000616668 449 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 AL158196.1-201ENST00000616786 434 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 RN7SL722P-201ENST00000617780 284 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 RN7SL565P-201ENST00000618246 284 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 OR56B2P-202ENST00000641377 2453 ntBASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
ARHGEF39Q8N4T4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ARHGEF39Q8N4T4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
ARHGEF39Q8N4T4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
ARHGEF39Q8N4T4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms