Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 AC010733.2-201ENST00000589496 5702 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 AC007390.2-201ENST00000606229 3803 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 MAPK10-349ENST00000641767 3661 ntBASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
DEPDC4Q8N2C3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 LINC02555-201ENST00000563933 1951 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 AC118273.1-201ENST00000525324 3006 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 Y_RNA.358-201ENST00000365491 99 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 Y_RNA.405-201ENST00000383979 100 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 Y_RNA.451-201ENST00000384200 100 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 Y_RNA.524-201ENST00000384564 100 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 Y_RNA.561-201ENST00000384694 100 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 RNA5SP296-201ENST00000410523 111 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 AP000275.1-201ENST00000411943 390 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 SDHDP6-201ENST00000414693 480 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 TOMM22P1-201ENST00000418578 312 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 AC124916.1-201ENST00000444020 547 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 GEMIN2P1-201ENST00000454246 752 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 AP000797.2-201ENST00000475768 606 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 RN7SL273P-201ENST00000481561 299 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 AC098869.1-201ENST00000481627 292 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 AC139453.3-201ENST00000493276 369 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 AC010469.2-201ENST00000496412 480 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 ENPP7P11-201ENST00000505915 627 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 AC010186.2-204ENST00000537668 439 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 SYF2P1-201ENST00000550658 413 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 AC006272.2-201ENST00000594725 163 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 MIR376A1-201ENST00000616574 68 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 AC131238.1-201ENST00000617135 328 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 U6.92-201ENST00000636464 89 ntBASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
DEPDC4Q8N2C3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
DEPDC4Q8N2C3 AC007785.2-201ENST00000598627 1916 ntBASIC5.15□□□□□ -1.58
DEPDC4Q8N2C3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.15□□□□□ -1.58
DEPDC4Q8N2C3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.15□□□□□ -1.58
DEPDC4Q8N2C3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
DEPDC4Q8N2C3 NOL8P1-201ENST00000508336 3529 ntBASIC5.15□□□□□ -1.58
DEPDC4Q8N2C3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
DEPDC4Q8N2C3 AL078621.3-201ENST00000623707 2042 ntBASIC5.15□□□□□ -1.58
DEPDC4Q8N2C3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.15□□□□□ -1.58
DEPDC4Q8N2C3 Y_RNA.237-201ENST00000364439 102 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 RNU6-336P-201ENST00000364891 107 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 Y_RNA.539-201ENST00000384635 107 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 SNORA48.4-201ENST00000391089 134 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 RPL35AP3-201ENST00000414680 288 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 AC091286.1-201ENST00000431233 461 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 CFL1P1-202ENST00000432948 411 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 MTND5P15-201ENST00000434246 349 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 Z82210.1-201ENST00000440037 231 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 AL161636.2-201ENST00000445179 927 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 ISCUP1-201ENST00000454451 448 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 ANXA2P1-201ENST00000505539 926 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 IGLV3-24-201ENST00000517477 197 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 RN7SL290P-201ENST00000578661 300 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 MIR6809-201ENST00000612189 116 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 AC022467.1-201ENST00000614738 749 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 AC139713.2-214ENST00000642059 1811 ntBASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
DEPDC4Q8N2C3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms