Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 U3.53-201ENST00000628922 216 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 MARK2P15-201ENST00000432204 2186 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.09□□□□□ -1.6
NPAS4Q8IUM7 AL049641.1-201ENST00000441055 1948 ntBASIC5.09□□□□□ -1.6
NPAS4Q8IUM7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.6
NPAS4Q8IUM7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
NPAS4Q8IUM7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.09□□□□□ -1.6
NPAS4Q8IUM7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 AC005183.1-201ENST00000603687 1979 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 SNORA63.7-201ENST00000365579 123 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 Y_RNA.476-201ENST00000384347 108 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 Y_RNA.527-201ENST00000384573 102 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 RNU6-1179P-201ENST00000384667 107 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 Z98745.1-201ENST00000402553 494 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 HMGB3P2-201ENST00000411913 584 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 Z85995.1-201ENST00000415547 335 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 FTH1P6-201ENST00000430768 320 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 AC009237.8-201ENST00000445492 379 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 NUTF2P7-201ENST00000453086 375 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 AC010618.1-201ENST00000469924 477 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 RNA5SP468-201ENST00000516782 93 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 RNU1-54P-201ENST00000517181 120 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 AC004024.1-201ENST00000549244 247 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 AC026371.1-201ENST00000551867 419 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 AC006349.1-201ENST00000555526 235 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 AC010653.1-201ENST00000571108 881 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 FAM157A-202ENST00000615155 405 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 AL355365.1-201ENST00000616480 294 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPAS4Q8IUM7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 RNA5SP479-201ENST00000364858 117 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AL590762.2-201ENST00000395798 571 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 MCFD2P1-201ENST00000417812 300 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 TOMM20P4-201ENST00000427861 435 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AL360271.2-201ENST00000447710 161 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AC010655.3-201ENST00000478818 450 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AF213884.1-201ENST00000488102 463 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 RNU6-1213P-201ENST00000517075 94 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 LRRC37A5P-203ENST00000580181 585 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AL020997.2-201ENST00000602607 184 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AL109918.3-201ENST00000603072 338 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AC002044.1-201ENST00000606707 158 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AL157817.1-201ENST00000614264 790 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AC007485.1-201ENST00000616755 206 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AC011944.2-201ENST00000624440 683 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AC068724.3-201ENST00000625906 87 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 AL031595.2-201ENST00000624215 19071 ntBASIC5.07□□□□□ -1.6
NPAS4Q8IUM7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 PCAT14-202ENST00000627127 3935 ntBASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 ZNF807-201ENST00000328088 1707 ntBASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 RNU6-1032P-201ENST00000384100 107 ntBASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 MIR578-201ENST00000384828 96 ntBASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 CRYBB2P1-203ENST00000415709 538 ntBASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 RPS15AP6-201ENST00000420703 385 ntBASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 AL158156.1-201ENST00000422509 473 ntBASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms