Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.39□□□□□ -1.87
USP43Q70EL4 MIR5685-201ENST00000579080 79 ntBASIC3.39□□□□□ -1.87
USP43Q70EL4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.39□□□□□ -1.87
USP43Q70EL4 CKS1BP3-201ENST00000600888 237 ntBASIC3.39□□□□□ -1.87
USP43Q70EL4 AL606490.9-201ENST00000603331 271 ntBASIC3.39□□□□□ -1.87
USP43Q70EL4 AC245014.2-201ENST00000603689 287 ntBASIC3.39□□□□□ -1.87
USP43Q70EL4 AC246785.4-201ENST00000605374 287 ntBASIC3.39□□□□□ -1.87
USP43Q70EL4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.39□□□□□ -1.87
USP43Q70EL4 MIR7151-201ENST00000617477 60 ntBASIC3.39□□□□□ -1.87
USP43Q70EL4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.39□□□□□ -1.87
USP43Q70EL4 AC112200.1-201ENST00000625015 234 ntBASIC3.39□□□□□ -1.87
USP43Q70EL4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.39□□□□□ -1.87
USP43Q70EL4 MIR1302-1-201ENST00000637932 143 ntBASIC3.39□□□□□ -1.87
USP43Q70EL4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP43Q70EL4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP43Q70EL4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USP43Q70EL4 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.38□□□□□ -1.87
USP43Q70EL4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP43Q70EL4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP43Q70EL4 Y_RNA.128-201ENST00000363391 112 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 SNORA33.2-201ENST00000365413 134 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 SNORA70.4-201ENST00000365509 134 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 Y_RNA.422-201ENST00000384054 114 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.38□□□□□ -1.87
USP43Q70EL4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.38□□□□□ -1.87
USP43Q70EL4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.38□□□□□ -1.87
USP43Q70EL4 SPA17P1-201ENST00000416656 452 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 AC008280.1-201ENST00000418851 412 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.38□□□□□ -1.87
USP43Q70EL4 MTCO2P5-201ENST00000422621 426 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 ISCA1P6-201ENST00000427740 390 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 RPL37P1-201ENST00000432310 284 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.38□□□□□ -1.87
USP43Q70EL4 AC002486.1-201ENST00000435098 391 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 AL356276.2-201ENST00000435919 558 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 RPS29P7-201ENST00000439662 171 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
USP43Q70EL4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.38□□□□□ -1.87
USP43Q70EL4 Y_RNA.632-201ENST00000459189 102 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 RPS15AP17-201ENST00000470598 390 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.38□□□□□ -1.87
USP43Q70EL4 AC010493.1-201ENST00000513479 292 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.38□□□□□ -1.87
USP43Q70EL4 Y_RNA.711-201ENST00000516993 102 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 RN7SKP289-201ENST00000517244 295 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.38□□□□□ -1.87
USP43Q70EL4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.38□□□□□ -1.87
USP43Q70EL4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.38□□□□□ -1.87
USP43Q70EL4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.38□□□□□ -1.87
USP43Q70EL4 OR5BN1P-201ENST00000532955 829 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.38□□□□□ -1.87
USP43Q70EL4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.38□□□□□ -1.87
USP43Q70EL4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.38□□□□□ -1.87
USP43Q70EL4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.38□□□□□ -1.87
USP43Q70EL4 HSPE1P5-201ENST00000561489 272 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USP43Q70EL4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.38□□□□□ -1.87
USP43Q70EL4 MIR4503-201ENST00000582187 83 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 SNORD39.3-201ENST00000584451 71 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USP43Q70EL4 TPMTP1-201ENST00000592307 737 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.38□□□□□ -1.87
USP43Q70EL4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.38□□□□□ -1.87
USP43Q70EL4 AL359999.1-201ENST00000604513 294 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 AC007621.1-201ENST00000604544 437 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 AC139792.3-201ENST00000623525 224 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.38□□□□□ -1.87
USP43Q70EL4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP43Q70EL4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP43Q70EL4 AC073073.2-201ENST00000609827 2578 ntBASIC3.38□□□□□ -1.87
USP43Q70EL4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USP43Q70EL4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.38□□□□□ -1.87
USP43Q70EL4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
USP43Q70EL4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.37□□□□□ -1.87
USP43Q70EL4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
USP43Q70EL4 AL133383.2-201ENST00000622958 2336 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP43Q70EL4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.37□□□□□ -1.87
USP43Q70EL4 NMD3P1-201ENST00000439704 1488 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP43Q70EL4 GNG5P1-201ENST00000255500 204 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 RNU1-75P-201ENST00000347264 129 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 Y_RNA.159-201ENST00000363674 87 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 RNU6-289P-201ENST00000364093 107 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AP002088.1-201ENST00000382740 395 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 RNU6-952P-201ENST00000391164 108 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 RPS20P2-201ENST00000402520 389 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 PRRC2CP1-201ENST00000404428 159 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AL354719.1-201ENST00000406535 843 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
USP43Q70EL4 RNA5SP118-201ENST00000410385 109 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 RNU6-1148P-201ENST00000410992 104 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 OR9R1P-201ENST00000412200 877 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 TPMTP2-201ENST00000414372 726 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.37□□□□□ -1.87
USP43Q70EL4 MTCO3P46-201ENST00000425787 232 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.37□□□□□ -1.87
USP43Q70EL4 SETP5-201ENST00000437270 562 ntBASIC3.37□□□□□ -1.87
USP43Q70EL4 AC105402.2-201ENST00000438503 358 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms