Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 RN7SKP269-201ENST00000365545 319 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 RNU6-926P-201ENST00000384075 107 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.435-201ENST00000384095 112 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 RNU6-318P-201ENST00000384283 103 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 RNA5SP241-201ENST00000391326 114 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 Z85995.1-201ENST00000415547 335 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 RPS15AP7-201ENST00000439294 405 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AC009296.1-201ENST00000443146 155 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AC009963.2-201ENST00000453431 138 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AC009963.3-201ENST00000458090 486 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 ACA64.4-201ENST00000459070 127 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AP001324.2-201ENST00000461163 319 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 RN7SL352P-201ENST00000466002 277 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AL049830.2-201ENST00000480072 201 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 SCARNA15.2-201ENST00000516409 127 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 RNA5SP441-201ENST00000516809 88 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 MIR4502-201ENST00000580432 81 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 MIR4423-201ENST00000580922 80 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AC108706.1-201ENST00000611053 297 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AC104465.1-201ENST00000611365 139 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 RMST_6.1-201ENST00000611980 203 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 MIR6721-201ENST00000617181 87 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 AL365265.1-201ENST00000621045 234 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 SRRM1P3-201ENST00000426911 2678 ntBASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDPF1Q6NVV7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 AC063976.2-201ENST00000425667 3556 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 UBE2WP1-201ENST00000362030 340 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.81-201ENST00000362997 102 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 SNORD115-32-201ENST00000364079 82 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 Y_RNA.398-201ENST00000383952 99 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 RNU6-843P-201ENST00000384454 104 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 RNA5SP91-201ENST00000390902 119 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 RPL11P3-201ENST00000395256 523 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 RPS4XP3-201ENST00000398541 413 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 RNU2-51P-201ENST00000410708 197 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 RPL21P50-201ENST00000417698 477 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 RPL5P7-201ENST00000444235 813 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 AC087477.1-201ENST00000465747 340 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 AC005532.2-201ENST00000467154 373 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 RPL23AP75-201ENST00000491601 451 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 RN7SL57P-201ENST00000493687 290 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 SCARNA5-201ENST00000516201 276 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 SNORA31.19-201ENST00000517079 126 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 AC130365.2-201ENST00000525882 1201 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 AC005363.1-201ENST00000530779 351 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 H3F3AP1-201ENST00000559984 334 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 FAM60BP-201ENST00000578364 658 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 AC005332.4-201ENST00000592752 579 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 AL137067.2-201ENST00000621202 131 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 AC008785.1-201ENST00000624475 456 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 AC104623.2-202ENST00000623477 4002 ntBASIC4.29□□□□□ -1.72
CDPF1Q6NVV7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms