Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC178Q5BJE1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 RNU6-845P-201ENST00000362578 103 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 RNU4-73P-201ENST00000363164 141 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 SNORD6-201ENST00000365444 73 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 RNU6-356P-201ENST00000384140 107 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 RPL21P24-201ENST00000413752 448 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 MTND1P14-201ENST00000427400 950 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 MRPS18BP2-201ENST00000434310 759 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 AC005094.1-201ENST00000440420 368 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 RNU7-182P-201ENST00000459009 62 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 MRPS17P3-201ENST00000465453 385 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 GMFBP1-201ENST00000467831 427 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 AC126389.1-201ENST00000477436 290 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 TRBV12-2-201ENST00000489763 344 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 HMGN1P11-201ENST00000508668 303 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 RNA5SP503-201ENST00000517047 117 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 AC103783.1-201ENST00000520506 373 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 AC034105.4-201ENST00000568304 277 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 LLPHP1-201ENST00000603571 367 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 AC090617.10-201ENST00000624308 134 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 U6.114-201ENST00000636407 96 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC178Q5BJE1 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 U8.11-201ENST00000384699 133 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 U8.12-201ENST00000384701 133 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 AL109755.1-201ENST00000401791 649 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 RNU6-712P-201ENST00000410558 100 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 SSXP9-201ENST00000417503 292 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 AL159169.1-201ENST00000421119 127 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 AL353678.1-201ENST00000422735 741 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 RPL35AP12-201ENST00000425362 338 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 DUTP6-201ENST00000425573 462 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 AL445584.1-201ENST00000431451 330 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 AC016696.1-201ENST00000446949 318 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 MTND1P18-201ENST00000448191 573 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 AL133547.1-201ENST00000448546 220 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 U8.18-201ENST00000459285 133 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 RNU4-29P-201ENST00000515943 174 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 RNU6-390P-201ENST00000516259 103 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 RNA5SP309-201ENST00000516670 106 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 RNU1-45P-201ENST00000517191 141 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 NARSP2-201ENST00000518524 679 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 AC125611.2-201ENST00000551907 647 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 AL360157.1-201ENST00000565962 87 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 RPS3AP23-202ENST00000574601 686 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 AL121757.2-201ENST00000611223 313 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 AC093838.1-201ENST00000613014 469 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 AC079684.1-201ENST00000621405 437 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 AL136221.1-201ENST00000621449 509 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 C2orf27A-204ENST00000623058 969 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 MTCO1P24-201ENST00000515438 1558 ntBASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC178Q5BJE1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC178Q5BJE1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC178Q5BJE1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC178Q5BJE1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC178Q5BJE1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC178Q5BJE1 RNU6-179P-201ENST00000363350 107 ntBASIC4.37□□□□□ -1.71
CCDC178Q5BJE1 SNORD81.2-201ENST00000365153 76 ntBASIC4.37□□□□□ -1.71
CCDC178Q5BJE1 RNU4-66P-201ENST00000365199 138 ntBASIC4.37□□□□□ -1.71
CCDC178Q5BJE1 RNU6-1029P-201ENST00000384109 107 ntBASIC4.37□□□□□ -1.71
CCDC178Q5BJE1 MIR135A2-201ENST00000384854 100 ntBASIC4.37□□□□□ -1.71
CCDC178Q5BJE1 Z98941.1-201ENST00000407764 100 ntBASIC4.37□□□□□ -1.71
CCDC178Q5BJE1 RNU4-65P-201ENST00000410473 140 ntBASIC4.37□□□□□ -1.71
CCDC178Q5BJE1 AC009161.1-201ENST00000417306 376 ntBASIC4.37□□□□□ -1.71
CCDC178Q5BJE1 BEND7P1-201ENST00000422058 457 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms