Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PRELID3BP4-201ENST00000515476 571 ntBASIC1.87□□□□□ -2.11
RFX7Q2KHR2 RNA5SP490-201ENST00000517141 136 ntBASIC1.87□□□□□ -2.11
RFX7Q2KHR2 HMGB1P14-201ENST00000557424 591 ntBASIC1.87□□□□□ -2.11
RFX7Q2KHR2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.87□□□□□ -2.11
RFX7Q2KHR2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.87□□□□□ -2.11
RFX7Q2KHR2 AC025165.5-201ENST00000602802 578 ntBASIC1.87□□□□□ -2.11
RFX7Q2KHR2 AL627230.6-201ENST00000611129 280 ntBASIC1.87□□□□□ -2.11
RFX7Q2KHR2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.87□□□□□ -2.11
RFX7Q2KHR2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RFX7Q2KHR2 AL513185.3-201ENST00000433335 1300 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 RNU6-1249P-201ENST00000363237 111 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 SNORA3A-201ENST00000364113 130 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 RNU6-670P-201ENST00000364312 104 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 RNU6-60P-201ENST00000364792 103 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 RNU6-198P-201ENST00000384258 104 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 RNU6-174P-201ENST00000410406 106 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 AC004965.1-201ENST00000413033 213 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 USP9YP6-201ENST00000413550 854 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 FO393419.3-201ENST00000428741 282 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.86□□□□□ -2.11
RFX7Q2KHR2 RPL7P29-201ENST00000437151 728 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.86□□□□□ -2.11
RFX7Q2KHR2 USP9YP34-201ENST00000453983 808 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.86□□□□□ -2.11
RFX7Q2KHR2 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.86□□□□□ -2.11
RFX7Q2KHR2 AC008494.2-201ENST00000514544 370 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.86□□□□□ -2.11
RFX7Q2KHR2 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.86□□□□□ -2.11
RFX7Q2KHR2 AC022662.1-201ENST00000580252 331 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 AC008749.1-201ENST00000597650 306 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RFX7Q2KHR2 AC006026.1-201ENST00000444025 1803 ntBASIC1.86□□□□□ -2.11
RFX7Q2KHR2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
RFX7Q2KHR2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 RNU6-98P-201ENST00000384173 107 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 MIR320A-201ENST00000385302 82 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 AL023807.1-201ENST00000407932 359 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 RPS15AP38-201ENST00000413110 372 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 Z85995.1-201ENST00000415547 335 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 ZNF90P2-204ENST00000419323 1075 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 DNAJC19P4-201ENST00000440115 345 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 snoU13.18-201ENST00000459483 104 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 SUMO1P1-201ENST00000497904 306 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 AC096751.1-202ENST00000502691 1067 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 AC074029.2-201ENST00000551045 634 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 DDX10P1-201ENST00000448545 1933 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 AL391987.6-201ENST00000305671 199 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 RNU6-234P-201ENST00000365229 104 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 MIR421-201ENST00000365696 85 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 MIR517C-201ENST00000385103 95 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 AL035405.1-201ENST00000400795 710 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 AC099677.1-201ENST00000420575 175 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 AC009237.2-201ENST00000421358 284 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 CABYRP1-201ENST00000465493 1045 ntBASIC1.85□□□□□ -2.11
RFX7Q2KHR2 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.85□□□□□ -2.11
RFX7Q2KHR2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.84□□□□□ -2.12
RFX7Q2KHR2 NUP58P1-201ENST00000502546 1738 ntBASIC1.84□□□□□ -2.12
RFX7Q2KHR2 RNU6-263P-201ENST00000363811 107 ntBASIC1.84□□□□□ -2.12
RFX7Q2KHR2 RNU1-42P-201ENST00000364033 160 ntBASIC1.84□□□□□ -2.12
RFX7Q2KHR2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.84□□□□□ -2.12
RFX7Q2KHR2 RPL35AP22-201ENST00000436855 335 ntBASIC1.84□□□□□ -2.12
RFX7Q2KHR2 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.84□□□□□ -2.12
RFX7Q2KHR2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.84□□□□□ -2.12
RFX7Q2KHR2 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.84□□□□□ -2.12
RFX7Q2KHR2 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.84□□□□□ -2.12
RFX7Q2KHR2 AP004607.1-201ENST00000524456 203 ntBASIC1.84□□□□□ -2.12
RFX7Q2KHR2 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.84□□□□□ -2.12
RFX7Q2KHR2 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.84□□□□□ -2.12
RFX7Q2KHR2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.84□□□□□ -2.12
RFX7Q2KHR2 AC002487.1-201ENST00000604565 994 ntBASIC1.84□□□□□ -2.12
RFX7Q2KHR2 SNORD14A-201ENST00000606526 91 ntBASIC1.84□□□□□ -2.12
RFX7Q2KHR2 AC135507.1-201ENST00000607214 561 ntBASIC1.84□□□□□ -2.12
RFX7Q2KHR2 AC004908.2-201ENST00000609090 574 ntBASIC1.84□□□□□ -2.12
RFX7Q2KHR2 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.83□□□□□ -2.12
RFX7Q2KHR2 RNU6-374P-201ENST00000364146 108 ntBASIC1.83□□□□□ -2.12
RFX7Q2KHR2 RNA5SP363-201ENST00000365072 115 ntBASIC1.83□□□□□ -2.12
RFX7Q2KHR2 U3.20-201ENST00000390909 217 ntBASIC1.83□□□□□ -2.12
RFX7Q2KHR2 MIR1276-201ENST00000408707 83 ntBASIC1.83□□□□□ -2.12
RFX7Q2KHR2 RPL27AP8-201ENST00000424277 446 ntBASIC1.83□□□□□ -2.12
RFX7Q2KHR2 AC092155.2-201ENST00000454675 477 ntBASIC1.83□□□□□ -2.12
RFX7Q2KHR2 COL6A4P2-205ENST00000509855 506 ntBASIC1.83□□□□□ -2.12
RFX7Q2KHR2 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.83□□□□□ -2.12
RFX7Q2KHR2 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms