Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 Y_RNA.650-201ENST00000459002 102 ntBASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 RN7SL443P-201ENST00000464331 290 ntBASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 SNORD116-25-201ENST00000516517 92 ntBASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 Y_RNA.777-201ENST00000516982 102 ntBASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 AC007458.1-201ENST00000542812 373 ntBASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 AC115085.1-201ENST00000588924 229 ntBASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 Y_RNA.771-201ENST00000598668 102 ntBASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 AL008718.3-201ENST00000610217 321 ntBASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 Y_RNA.802-201ENST00000614892 130 ntBASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 MIR6075-201ENST00000620782 95 ntBASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 Y_RNA.789-201ENST00000622480 102 ntBASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 AC109446.4-201ENST00000623235 2755 ntBASIC4.84□□□□□ -1.63
RSPO4Q2I0M5 OR56B2P-202ENST00000641377 2453 ntBASIC4.84□□□□□ -1.64
RSPO4Q2I0M5 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
RSPO4Q2I0M5 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.84□□□□□ -1.64
RSPO4Q2I0M5 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
RSPO4Q2I0M5 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RSPO4Q2I0M5 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RSPO4Q2I0M5 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.84□□□□□ -1.64
RSPO4Q2I0M5 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RSPO4Q2I0M5 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
RSPO4Q2I0M5 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 Y_RNA.275-201ENST00000364726 110 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 U8.8-201ENST00000365399 135 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 MIR569-201ENST00000385228 96 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 RPL21P75-201ENST00000396599 483 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 RPL21P28-201ENST00000401418 483 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 RNA5SP494-201ENST00000410653 129 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 RN7SKP159-201ENST00000410657 292 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AL590556.1-201ENST00000423231 483 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AC073063.1-201ENST00000434352 607 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 PHBP16-201ENST00000446318 950 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AC079168.2-201ENST00000453977 416 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 RPL21P11-201ENST00000461458 483 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 RPL21P39-201ENST00000463605 483 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AL136126.1-201ENST00000473603 402 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AC132942.1-201ENST00000486753 483 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AC093591.1-201ENST00000491435 481 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 RPL21P16-201ENST00000495531 483 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 RNU6-971P-201ENST00000516920 106 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AC087369.1-201ENST00000520775 996 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AC009127.3-201ENST00000570531 403 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 MIR5696-201ENST00000578474 85 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 MIR3613-201ENST00000579844 87 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AC037487.3-201ENST00000606668 112 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AL445567.2-201ENST00000618935 498 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 AC112200.1-201ENST00000625015 234 ntBASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.83□□□□□ -1.64
RSPO4Q2I0M5 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 PROS2P-201ENST00000474651 1951 ntBASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 RN7SKP185-201ENST00000362813 326 ntBASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 AC019155.1-201ENST00000382242 574 ntBASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 RNU6-80P-201ENST00000384195 107 ntBASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 MIR554-201ENST00000384874 96 ntBASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 MIR137-201ENST00000385223 102 ntBASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 SNORA40-201ENST00000388090 126 ntBASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 RNA5SP372-201ENST00000390836 115 ntBASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 RPS26P8-201ENST00000393490 348 ntBASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 RN7SKP202-201ENST00000410439 330 ntBASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 AL353748.1-201ENST00000440753 474 ntBASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 AL137159.1-201ENST00000452808 512 ntBASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 RPL23AP65-201ENST00000475608 468 ntBASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 AC012123.2-201ENST00000485809 248 ntBASIC4.82□□□□□ -1.64
RSPO4Q2I0M5 AC135721.1-201ENST00000497954 479 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms