Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.03□□□□□ -1.92
GABPAQ06546 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.03□□□□□ -1.92
GABPAQ06546 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.03□□□□□ -1.92
GABPAQ06546 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.03□□□□□ -1.92
GABPAQ06546 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.03□□□□□ -1.92
GABPAQ06546 MIR3945-201ENST00000581853 98 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.03□□□□□ -1.92
GABPAQ06546 AC105224.1-201ENST00000587055 421 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.03□□□□□ -1.92
GABPAQ06546 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 AC002546.1-201ENST00000588041 2504 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
GABPAQ06546 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
GABPAQ06546 AC012321.1-201ENST00000561622 1588 ntBASIC3.03□□□□□ -1.92
GABPAQ06546 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.03□□□□□ -1.92
GABPAQ06546 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.03□□□□□ -1.93
GABPAQ06546 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.02□□□□□ -1.93
GABPAQ06546 RNU6-660P-201ENST00000364566 109 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 RNU1-100P-201ENST00000365255 165 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 DYNLT3P1-201ENST00000378574 347 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.02□□□□□ -1.93
GABPAQ06546 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
GABPAQ06546 USP9YP20-201ENST00000419224 558 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.02□□□□□ -1.93
GABPAQ06546 PPP1R11P2-201ENST00000423543 382 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 RPL27AP8-201ENST00000424277 446 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
GABPAQ06546 AC234781.2-201ENST00000426370 994 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.02□□□□□ -1.93
GABPAQ06546 SNRPEP4-201ENST00000435815 279 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.02□□□□□ -1.93
GABPAQ06546 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.02□□□□□ -1.93
GABPAQ06546 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
GABPAQ06546 AL590639.1-201ENST00000456484 337 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 SRIP1-201ENST00000489235 288 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.02□□□□□ -1.93
GABPAQ06546 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.02□□□□□ -1.93
GABPAQ06546 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.02□□□□□ -1.93
GABPAQ06546 HMGN1P28-201ENST00000521340 364 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.02□□□□□ -1.93
GABPAQ06546 AP003122.3-201ENST00000526316 255 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 AC068587.4-201ENST00000533893 186 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
GABPAQ06546 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.02□□□□□ -1.93
GABPAQ06546 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.02□□□□□ -1.93
GABPAQ06546 AC012119.1-201ENST00000603184 222 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 AL139344.1-201ENST00000605228 195 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 AC107214.2-201ENST00000608204 634 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 AC131159.1-201ENST00000621854 213 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 AC009268.2-201ENST00000621925 457 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 AC010149.2-201ENST00000637608 315 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
GABPAQ06546 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.02□□□□□ -1.93
GABPAQ06546 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.02□□□□□ -1.93
GABPAQ06546 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
GABPAQ06546 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
GABPAQ06546 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
GABPAQ06546 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
GABPAQ06546 AL359704.1-201ENST00000411586 781 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 AC005005.2-201ENST00000420779 380 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 AC018630.2-202ENST00000422992 927 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.01□□□□□ -1.93
GABPAQ06546 MTCYBP39-201ENST00000437562 491 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 TRIM60P18-201ENST00000441518 828 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 MRPL50P4-201ENST00000446432 475 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.01□□□□□ -1.93
GABPAQ06546 MTND2P24-201ENST00000453434 806 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 AL049874.1-201ENST00000489560 388 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.01□□□□□ -1.93
GABPAQ06546 RN7SKP24-201ENST00000515888 284 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
GABPAQ06546 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
GABPAQ06546 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.01□□□□□ -1.93
GABPAQ06546 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
GABPAQ06546 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.01□□□□□ -1.93
GABPAQ06546 AC012435.1-202ENST00000568772 240 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 MIR3921-201ENST00000577308 85 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.01□□□□□ -1.93
GABPAQ06546 AL353778.1-201ENST00000603149 408 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 AC107294.1-201ENST00000609524 467 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 AC009570.1-201ENST00000609599 745 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 AC002076.2-201ENST00000617362 122 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.01□□□□□ -1.93
GABPAQ06546 AL159972.1-201ENST00000625150 448 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 AC019226.1-201ENST00000625666 515 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 CTSLP2-204ENST00000629029 392 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.01□□□□□ -1.93
GABPAQ06546 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
GABPAQ06546 AC092125.1-201ENST00000562568 1995 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 CUL1P1-201ENST00000509510 2425 ntBASIC3.01□□□□□ -1.93
GABPAQ06546 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.01□□□□□ -1.93
GABPAQ06546 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.01□□□□□ -1.93
GABPAQ06546 AC011460.1-201ENST00000636268 1834 ntBASIC3□□□□□ -1.93
GABPAQ06546 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3□□□□□ -1.93
GABPAQ06546 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
GABPAQ06546 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3□□□□□ -1.93
GABPAQ06546 AC009902.3-201ENST00000606235 2172 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms