Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AL137014.1-201ENST00000420490 1226 ntBASIC3.31□□□□□ -1.88
SEC61A1P61619 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.31□□□□□ -1.88
SEC61A1P61619 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.31□□□□□ -1.88
SEC61A1P61619 TXNP1-201ENST00000441872 371 ntBASIC3.31□□□□□ -1.88
SEC61A1P61619 CALM1P1-201ENST00000442082 433 ntBASIC3.31□□□□□ -1.88
SEC61A1P61619 HMGB3P8-201ENST00000449709 577 ntBASIC3.31□□□□□ -1.88
SEC61A1P61619 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.31□□□□□ -1.88
SEC61A1P61619 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.31□□□□□ -1.88
SEC61A1P61619 ELOCP23-201ENST00000452014 332 ntBASIC3.31□□□□□ -1.88
SEC61A1P61619 RN7SL542P-201ENST00000467147 294 ntBASIC3.31□□□□□ -1.88
SEC61A1P61619 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.31□□□□□ -1.88
SEC61A1P61619 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SEC61A1P61619 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.31□□□□□ -1.88
SEC61A1P61619 RNU6-352P-201ENST00000516908 107 ntBASIC3.31□□□□□ -1.88
SEC61A1P61619 RN7SKP60-201ENST00000516985 239 ntBASIC3.31□□□□□ -1.88
SEC61A1P61619 AC023632.4-201ENST00000517783 191 ntBASIC3.31□□□□□ -1.88
SEC61A1P61619 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.31□□□□□ -1.88
SEC61A1P61619 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.31□□□□□ -1.88
SEC61A1P61619 FAM60DP-201ENST00000524174 632 ntBASIC3.31□□□□□ -1.88
SEC61A1P61619 SUB1P1-201ENST00000524415 382 ntBASIC3.31□□□□□ -1.88
SEC61A1P61619 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.31□□□□□ -1.88
SEC61A1P61619 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.31□□□□□ -1.88
SEC61A1P61619 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.31□□□□□ -1.88
SEC61A1P61619 MIR4738-201ENST00000579134 87 ntBASIC3.31□□□□□ -1.88
SEC61A1P61619 AC006130.2-201ENST00000586202 326 ntBASIC3.31□□□□□ -1.88
SEC61A1P61619 AC011712.1-201ENST00000588959 234 ntBASIC3.31□□□□□ -1.88
SEC61A1P61619 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.31□□□□□ -1.88
SEC61A1P61619 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.31□□□□□ -1.88
SEC61A1P61619 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.31□□□□□ -1.88
SEC61A1P61619 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.31□□□□□ -1.88
SEC61A1P61619 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SEC61A1P61619 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.31□□□□□ -1.88
SEC61A1P61619 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
SEC61A1P61619 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SEC61A1P61619 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SEC61A1P61619 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.31□□□□□ -1.88
SEC61A1P61619 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SEC61A1P61619 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SEC61A1P61619 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.3□□□□□ -1.88
SEC61A1P61619 RNU6-511P-201ENST00000363496 107 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SEC61A1P61619 SNORD3H-201ENST00000384486 214 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 Y_RNA.529-201ENST00000384586 119 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 RN7SKP202-201ENST00000410439 330 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 RPS7P15-201ENST00000415804 584 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 UBE2FP1-201ENST00000416536 447 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 RPL31P12-201ENST00000422587 358 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.3□□□□□ -1.88
SEC61A1P61619 RPL36AP53-201ENST00000432891 316 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.3□□□□□ -1.88
SEC61A1P61619 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.3□□□□□ -1.88
SEC61A1P61619 AC093019.1-201ENST00000443135 252 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 RANP8-201ENST00000444720 713 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.3□□□□□ -1.88
SEC61A1P61619 AL645939.1-201ENST00000453429 797 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.3□□□□□ -1.88
SEC61A1P61619 HMGB3P30-201ENST00000457863 606 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 S100A11P1-201ENST00000477525 312 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 RPS15AP36-201ENST00000492022 382 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SEC61A1P61619 AC078918.1-201ENST00000498515 228 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.3□□□□□ -1.88
SEC61A1P61619 MTND3P22-201ENST00000510932 243 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 AC010486.1-201ENST00000511793 424 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 SUMO2P20-201ENST00000520803 283 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 AC008489.1-201ENST00000524271 483 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.3□□□□□ -1.88
SEC61A1P61619 AC011979.2-201ENST00000527568 352 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 DEFB108D-201ENST00000527787 222 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 GLYCAM1-201ENST00000546596 285 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.3□□□□□ -1.88
SEC61A1P61619 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.3□□□□□ -1.88
SEC61A1P61619 HSPE1P5-201ENST00000561489 272 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 AC006270.2-201ENST00000578523 652 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 MIR5685-201ENST00000579080 79 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.3□□□□□ -1.88
SEC61A1P61619 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.3□□□□□ -1.88
SEC61A1P61619 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.3□□□□□ -1.88
SEC61A1P61619 AC006254.3-201ENST00000603353 884 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.3□□□□□ -1.88
SEC61A1P61619 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SEC61A1P61619 AC015967.1-201ENST00000619893 476 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 AC244100.1-202ENST00000621554 382 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 MIR7153-201ENST00000637758 57 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 AC099654.10-201ENST00000640395 161 ntBASIC3.3□□□□□ -1.88
SEC61A1P61619 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.3□□□□□ -1.88
SEC61A1P61619 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SEC61A1P61619 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A1P61619 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
SEC61A1P61619 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A1P61619 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SEC61A1P61619 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A1P61619 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A1P61619 AL157700.1-201ENST00000561973 1432 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 AL021368.2-201ENST00000606125 5352 ntBASIC3.29□□□□□ -1.88
SEC61A1P61619 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A1P61619 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A1P61619 ASNSP3-201ENST00000451989 1306 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms