Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.25□□□□□ -1.73
GFRA1P56159 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.25□□□□□ -1.73
GFRA1P56159 AC116096.1-201ENST00000566804 2314 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
GFRA1P56159 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GFRA1P56159 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GFRA1P56159 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GFRA1P56159 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
GFRA1P56159 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GFRA1P56159 RNU6-490P-201ENST00000362985 107 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 Y_RNA.144-201ENST00000363521 113 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 Y_RNA.151-201ENST00000363566 112 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
GFRA1P56159 SNORA56-201ENST00000383966 129 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.24□□□□□ -1.73
GFRA1P56159 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.24□□□□□ -1.73
GFRA1P56159 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.24□□□□□ -1.73
GFRA1P56159 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.24□□□□□ -1.73
GFRA1P56159 AC073587.1-201ENST00000447093 876 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 PCMTD1P1-201ENST00000455560 355 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
GFRA1P56159 AC011005.2-201ENST00000487324 359 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 RPL36AP41-201ENST00000493820 306 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 SNORA25.10-201ENST00000515926 124 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 SCARNA16.2-201ENST00000516520 172 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.24□□□□□ -1.73
GFRA1P56159 AC091516.1-201ENST00000549191 703 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
GFRA1P56159 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.24□□□□□ -1.73
GFRA1P56159 AL160281.1-201ENST00000605307 311 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 AC090132.2-201ENST00000615881 347 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.24□□□□□ -1.73
GFRA1P56159 AC015914.2-201ENST00000618167 288 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 AP000346.3-201ENST00000622821 210 ntBASIC4.24□□□□□ -1.73
GFRA1P56159 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.24□□□□□ -1.73
GFRA1P56159 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.24□□□□□ -1.73
GFRA1P56159 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.24□□□□□ -1.73
GFRA1P56159 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
GFRA1P56159 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GFRA1P56159 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
GFRA1P56159 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GFRA1P56159 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
GFRA1P56159 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.23□□□□□ -1.73
GFRA1P56159 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
GFRA1P56159 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.23□□□□□ -1.73
GFRA1P56159 AC008568.2-201ENST00000623862 2313 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
GFRA1P56159 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
GFRA1P56159 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
GFRA1P56159 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
GFRA1P56159 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
GFRA1P56159 RNU6-1032P-201ENST00000384100 107 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
GFRA1P56159 RNU6-1106P-201ENST00000390845 107 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 RNA5SP397-201ENST00000391323 118 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.23□□□□□ -1.73
GFRA1P56159 CKS1BP6-201ENST00000424932 240 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 AL732292.1-201ENST00000426692 226 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 TOMM20P4-201ENST00000427861 435 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 AC004938.1-201ENST00000438468 308 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.23□□□□□ -1.73
GFRA1P56159 PIGFP3-201ENST00000441918 722 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 H2AFZP6-201ENST00000444403 394 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 RNA5SP103-201ENST00000459503 118 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.23□□□□□ -1.73
GFRA1P56159 RN7SL354P-201ENST00000469282 294 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.23□□□□□ -1.73
GFRA1P56159 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.23□□□□□ -1.73
GFRA1P56159 RNA5SP249-201ENST00000516127 99 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 RNU6-1046P-201ENST00000516538 107 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 RNU6-264P-201ENST00000517134 104 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.23□□□□□ -1.73
GFRA1P56159 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.23□□□□□ -1.73
GFRA1P56159 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.23□□□□□ -1.73
GFRA1P56159 AL390726.5-202ENST00000564800 256 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 AC053481.4-201ENST00000583164 216 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.23□□□□□ -1.73
GFRA1P56159 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GFRA1P56159 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
GFRA1P56159 A2MP1-204ENST00000566278 4130 ntBASIC4.23□□□□□ -1.73
GFRA1P56159 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
GFRA1P56159 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GFRA1P56159 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GFRA1P56159 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
GFRA1P56159 DHX9P1-201ENST00000436565 3076 ntBASIC4.22□□□□□ -1.73
GFRA1P56159 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GFRA1P56159 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GFRA1P56159 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.22□□□□□ -1.73
GFRA1P56159 Y_RNA.158-201ENST00000363651 101 ntBASIC4.22□□□□□ -1.73
GFRA1P56159 SNORD113.2-201ENST00000364166 89 ntBASIC4.22□□□□□ -1.73
GFRA1P56159 Y_RNA.364-201ENST00000365532 101 ntBASIC4.22□□□□□ -1.73
GFRA1P56159 RNU6-790P-201ENST00000384479 105 ntBASIC4.22□□□□□ -1.73
GFRA1P56159 RNU6-331P-201ENST00000384724 107 ntBASIC4.22□□□□□ -1.73
GFRA1P56159 MIR607-201ENST00000385241 96 ntBASIC4.22□□□□□ -1.73
GFRA1P56159 MRPL42P3-201ENST00000401492 326 ntBASIC4.22□□□□□ -1.73
GFRA1P56159 AP000580.1-201ENST00000404439 358 ntBASIC4.22□□□□□ -1.73
GFRA1P56159 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.22□□□□□ -1.73
GFRA1P56159 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.22□□□□□ -1.73
GFRA1P56159 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms