Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SUMO3P55854 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SUMO3P55854 RNU1-94P-201ENST00000362627 173 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 SNORA62-201ENST00000365493 153 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 RNU4-20P-201ENST00000365601 151 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 MIR301A-201ENST00000385261 86 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 RNU6-332P-201ENST00000391193 108 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 AL356776.1-201ENST00000406574 447 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 AC022028.1-201ENST00000412054 408 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.74□□□□□ -1.81
SUMO3P55854 AC092047.1-201ENST00000424997 240 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 AL592045.1-201ENST00000429867 352 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.74□□□□□ -1.81
SUMO3P55854 ERLEC1P1-201ENST00000433806 578 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 Z82210.1-201ENST00000440037 231 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.74□□□□□ -1.81
SUMO3P55854 FABP5P15-201ENST00000453566 214 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 SCARNA18-201ENST00000459004 134 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 AC010618.1-201ENST00000469924 477 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.74□□□□□ -1.81
SUMO3P55854 KC877373.1-201ENST00000479066 408 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.74□□□□□ -1.81
SUMO3P55854 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.74□□□□□ -1.81
SUMO3P55854 RNU7-143P-201ENST00000516781 65 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 RNA5SP290-201ENST00000517133 127 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.74□□□□□ -1.81
SUMO3P55854 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.74□□□□□ -1.81
SUMO3P55854 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.74□□□□□ -1.81
SUMO3P55854 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.74□□□□□ -1.81
SUMO3P55854 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.74□□□□□ -1.81
SUMO3P55854 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SUMO3P55854 MIR3939-201ENST00000582614 106 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 AC053481.4-201ENST00000583164 216 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.74□□□□□ -1.81
SUMO3P55854 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SUMO3P55854 AC104662.1-201ENST00000604448 511 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.74□□□□□ -1.81
SUMO3P55854 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.74□□□□□ -1.81
SUMO3P55854 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SUMO3P55854 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SUMO3P55854 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.74□□□□□ -1.81
SUMO3P55854 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SUMO3P55854 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SUMO3P55854 AC002546.1-201ENST00000588041 2504 ntBASIC3.74□□□□□ -1.81
SUMO3P55854 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SUMO3P55854 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SUMO3P55854 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SUMO3P55854 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SUMO3P55854 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.73□□□□□ -1.81
SUMO3P55854 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SUMO3P55854 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.73□□□□□ -1.81
SUMO3P55854 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.73□□□□□ -1.81
SUMO3P55854 RNA5SP443-201ENST00000363083 132 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 SNORA4.3-201ENST00000365564 137 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SUMO3P55854 RPS26P8-201ENST00000393490 348 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 AL592114.1-201ENST00000403842 483 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 AL591034.1-201ENST00000407447 340 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.73□□□□□ -1.81
SUMO3P55854 TMEM167AP1-201ENST00000423409 219 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 GPM6BP2-201ENST00000432046 144 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.73□□□□□ -1.81
SUMO3P55854 AL121601.2-201ENST00000438019 707 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 GPM6BP1-201ENST00000446387 144 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 AC008264.1-201ENST00000447612 367 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 HMGN2P7-201ENST00000456186 273 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.73□□□□□ -1.81
SUMO3P55854 MTCO3P9-201ENST00000506989 781 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.73□□□□□ -1.81
SUMO3P55854 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.73□□□□□ -1.81
SUMO3P55854 NDUFB4P9-201ENST00000511646 388 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 AC104136.1-201ENST00000512969 394 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 RNA5SP154-201ENST00000516193 111 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.73□□□□□ -1.81
SUMO3P55854 CASP1P1-201ENST00000526345 212 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.73□□□□□ -1.81
SUMO3P55854 AC078814.3-201ENST00000553036 491 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.73□□□□□ -1.81
SUMO3P55854 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.73□□□□□ -1.81
SUMO3P55854 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
SUMO3P55854 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.73□□□□□ -1.81
SUMO3P55854 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.73□□□□□ -1.81
SUMO3P55854 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.73□□□□□ -1.81
SUMO3P55854 AC023043.4-201ENST00000612081 449 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.73□□□□□ -1.81
SUMO3P55854 Z99571.1-201ENST00000636677 394 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 AL049641.1-201ENST00000441055 1948 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SUMO3P55854 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SUMO3P55854 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SUMO3P55854 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SUMO3P55854 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SUMO3P55854 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
SUMO3P55854 ZNF807-201ENST00000328088 1707 ntBASIC3.73□□□□□ -1.81
SUMO3P55854 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SUMO3P55854 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SUMO3P55854 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.72□□□□□ -1.81
SUMO3P55854 CUL1P1-201ENST00000509510 2425 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 HSPA8P4-201ENST00000511877 1920 ntBASIC3.72□□□□□ -1.81
SUMO3P55854 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms