Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.93□□□□□ -1.94
HMGCS2P54868 RNU6-678P-201ENST00000516832 109 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.93□□□□□ -1.94
HMGCS2P54868 ERHP1-201ENST00000523006 310 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.93□□□□□ -1.94
HMGCS2P54868 SNRPGP16-201ENST00000533275 226 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 OR6C7P-201ENST00000547875 934 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 TRAV37-201ENST00000553906 342 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.93□□□□□ -1.94
HMGCS2P54868 AC109446.2-201ENST00000567872 497 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 COX6CP3-201ENST00000580869 223 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.93□□□□□ -1.94
HMGCS2P54868 AL353997.4-201ENST00000586196 166 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 AP001330.4-201ENST00000604350 154 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 AC007938.3-201ENST00000604965 623 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 AC090186.1-201ENST00000605991 572 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 AC122133.1-201ENST00000613964 233 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 AC078883.4-201ENST00000623218 367 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 CR381653.2-201ENST00000624041 768 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
HMGCS2P54868 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HMGCS2P54868 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.93□□□□□ -1.94
HMGCS2P54868 MAPK10-362ENST00000641864 4484 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 AC103988.1-201ENST00000566382 2177 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 AL161431.1-201ENST00000618966 4205 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 AC006020.1-201ENST00000420179 1854 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
HMGCS2P54868 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HMGCS2P54868 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HMGCS2P54868 RNU6-28P-201ENST00000362378 107 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 Y_RNA.18-201ENST00000362461 102 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.92□□□□□ -1.94
HMGCS2P54868 RPL23AP39-201ENST00000415533 405 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGCS2P54868 FCF1P1-201ENST00000432690 571 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.92□□□□□ -1.94
HMGCS2P54868 UBE2FP3-201ENST00000436366 524 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 LARP1BP3-201ENST00000437229 869 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 HIGD1AP2-201ENST00000446367 280 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGCS2P54868 SETP11-201ENST00000473027 690 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 AC072039.1-201ENST00000477611 581 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 AC006483.1-201ENST00000487308 313 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 AC096751.1-202ENST00000502691 1067 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.92□□□□□ -1.94
HMGCS2P54868 COX7A2P2-201ENST00000505291 250 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 KLHL2P1-201ENST00000508691 521 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 AC093809.1-201ENST00000509155 340 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 AC010625.1-201ENST00000511296 403 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HMGCS2P54868 SNORA31.8-201ENST00000516327 108 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGCS2P54868 SETP7-201ENST00000552169 453 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGCS2P54868 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.92□□□□□ -1.94
HMGCS2P54868 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGCS2P54868 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.92□□□□□ -1.94
HMGCS2P54868 WISP1-OT1-201ENST00000602893 642 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 AC097468.3-201ENST00000607956 456 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGCS2P54868 MIR7843-201ENST00000622274 79 ntBASIC2.92□□□□□ -1.94
HMGCS2P54868 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGCS2P54868 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HMGCS2P54868 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
HMGCS2P54868 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGCS2P54868 MTND5P27-201ENST00000428871 1720 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
HMGCS2P54868 MTND4P16-201ENST00000466108 1367 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HMGCS2P54868 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HMGCS2P54868 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HMGCS2P54868 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HMGCS2P54868 SAR1AP2-201ENST00000392696 594 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 RN7SKP266-201ENST00000410232 287 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGCS2P54868 RPL7P10-201ENST00000417407 739 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.91□□□□□ -1.94
HMGCS2P54868 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGCS2P54868 TRIAP1P1-201ENST00000427062 225 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGCS2P54868 RSU1P2-202ENST00000437884 485 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 SNRPEP7-201ENST00000438350 220 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 SDCBPP1-201ENST00000440192 890 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HMGCS2P54868 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGCS2P54868 MTATP6P26-201ENST00000445926 662 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HMGCS2P54868 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGCS2P54868 MTND3P7-201ENST00000474435 343 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 AC092185.1-201ENST00000491371 97 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGCS2P54868 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.91□□□□□ -1.94
HMGCS2P54868 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGCS2P54868 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.91□□□□□ -1.94
HMGCS2P54868 AC024589.1-201ENST00000512207 263 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 RNA5SP216-201ENST00000516111 123 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGCS2P54868 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms