Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA4P54764 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
EPHA4P54764 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA4P54764 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.12□□□□□ -1.59
EPHA4P54764 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA4P54764 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA4P54764 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
EPHA4P54764 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHA4P54764 AC100757.1-201ENST00000616872 1835 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EPHA4P54764 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHA4P54764 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
EPHA4P54764 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
EPHA4P54764 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
EPHA4P54764 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
EPHA4P54764 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EPHA4P54764 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
EPHA4P54764 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EPHA4P54764 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
EPHA4P54764 RNU6-227P-201ENST00000362865 103 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 snoU2_19.2-201ENST00000363024 80 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 RN7SKP227-201ENST00000364445 330 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 RNU6-662P-201ENST00000384253 104 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
EPHA4P54764 MIR937-201ENST00000401271 86 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 AL645733.1-201ENST00000402250 217 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 RN7SKP125-201ENST00000410481 302 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.11□□□□□ -1.59
EPHA4P54764 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.11□□□□□ -1.59
EPHA4P54764 TMEM167AP1-201ENST00000423409 219 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 AL356867.1-201ENST00000429623 299 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 MTCO3P29-201ENST00000432119 779 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 BX679664.1-201ENST00000434429 253 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 AP000797.2-201ENST00000475768 606 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 RN7SL826P-201ENST00000479724 288 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 RN7SL97P-201ENST00000486780 299 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 AC010469.2-201ENST00000496412 480 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 EDDM3DP-201ENST00000554692 434 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 NDUFB4P11-201ENST00000560510 395 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.11□□□□□ -1.59
EPHA4P54764 AC244107.2-201ENST00000611773 76 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EPHA4P54764 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EPHA4P54764 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
EPHA4P54764 AL034549.2-201ENST00000618285 3373 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EPHA4P54764 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
EPHA4P54764 GVINP1-202ENST00000531871 7271 ntBASIC5.11□□□□□ -1.59
EPHA4P54764 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.11□□□□□ -1.59
EPHA4P54764 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
EPHA4P54764 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.1□□□□□ -1.59
EPHA4P54764 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
EPHA4P54764 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
EPHA4P54764 AL022311.1-201ENST00000623726 19416 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.1□□□□□ -1.59
EPHA4P54764 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
EPHA4P54764 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
EPHA4P54764 U3.3-201ENST00000362986 216 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 Y_RNA.83-201ENST00000363005 113 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
EPHA4P54764 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
EPHA4P54764 MIR1298-201ENST00000408783 112 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.1□□□□□ -1.59
EPHA4P54764 MTATP6P29-201ENST00000415057 132 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 AC124916.1-201ENST00000444020 547 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 AC079354.2-201ENST00000453523 154 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 AL136097.1-201ENST00000456945 913 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 AC009127.1-201ENST00000467090 155 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 COX6B1P2-201ENST00000489624 230 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 AC022133.1-201ENST00000490961 571 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 RN7SL808P-201ENST00000496066 299 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 ENPP7P11-201ENST00000505915 627 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.1□□□□□ -1.59
EPHA4P54764 RNU6-377P-201ENST00000515965 102 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 SCARNA15.2-201ENST00000516409 127 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 RN7SKP66-201ENST00000516681 231 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 ASNSP1-201ENST00000518311 1939 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 AC116096.1-201ENST00000566804 2314 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 MIR4646-201ENST00000580775 63 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.1□□□□□ -1.59
EPHA4P54764 AC004925.1-201ENST00000624256 2706 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 AC091903.1-201ENST00000624322 454 ntBASIC5.1□□□□□ -1.59
EPHA4P54764 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
EPHA4P54764 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
EPHA4P54764 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.1□□□□□ -1.59
EPHA4P54764 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
EPHA4P54764 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
EPHA4P54764 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
EPHA4P54764 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
EPHA4P54764 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
EPHA4P54764 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.09□□□□□ -1.59
EPHA4P54764 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
EPHA4P54764 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
EPHA4P54764 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.09□□□□□ -1.59
EPHA4P54764 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
EPHA4P54764 OR9K1P-202ENST00000641111 3217 ntBASIC5.09□□□□□ -1.59
EPHA4P54764 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
EPHA4P54764 Y_RNA.143-201ENST00000363520 106 ntBASIC5.09□□□□□ -1.59
EPHA4P54764 U3.6-201ENST00000363622 211 ntBASIC5.09□□□□□ -1.59
EPHA4P54764 Y_RNA.405-201ENST00000383979 100 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms