Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
HCFC1P51610 RNU6-878P-201ENST00000384578 110 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 RNU2-47P-201ENST00000410649 186 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.75□□□□□ -1.97
HCFC1P51610 AC019097.1-201ENST00000424783 735 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 FTH1P1-201ENST00000437933 532 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.75□□□□□ -1.97
HCFC1P51610 AC140076.1-201ENST00000449897 361 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.75□□□□□ -1.97
HCFC1P51610 AC234775.1-201ENST00000454247 670 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 RPL23AP41-201ENST00000484754 458 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AF131216.2-201ENST00000512316 564 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.75□□□□□ -1.97
HCFC1P51610 RNU6-201P-201ENST00000517100 61 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 RNU4-60P-201ENST00000517239 135 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.75□□□□□ -1.97
HCFC1P51610 AP003385.6-201ENST00000531603 374 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AC009063.1-201ENST00000563342 702 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.75□□□□□ -1.97
HCFC1P51610 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.75□□□□□ -1.97
HCFC1P51610 AL161729.4-201ENST00000604650 476 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AC113194.1-201ENST00000606037 500 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AC138749.5-201ENST00000611461 208 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AC116165.2-201ENST00000616705 206 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AC009268.2-201ENST00000621925 457 ntBASIC2.75□□□□□ -1.97
HCFC1P51610 AP001148.1-201ENST00000624124 2359 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
HCFC1P51610 AC005832.2-201ENST00000538921 1430 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.74□□□□□ -1.97
HCFC1P51610 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.74□□□□□ -1.97
HCFC1P51610 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.74□□□□□ -1.97
HCFC1P51610 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HCFC1P51610 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HCFC1P51610 MIR449A-201ENST00000362113 91 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 Y_RNA.3-201ENST00000362331 103 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 RNU6-181P-201ENST00000363225 107 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 U3.11-201ENST00000364476 212 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
HCFC1P51610 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.74□□□□□ -1.97
HCFC1P51610 RNU6-348P-201ENST00000384386 107 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.74□□□□□ -1.97
HCFC1P51610 AC005517.2-201ENST00000424673 553 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 AC233728.2-201ENST00000425348 757 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 MTND1P2-201ENST00000430604 821 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HCFC1P51610 MTATP6P13-201ENST00000438531 667 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 USP9YP15-201ENST00000442391 422 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.74□□□□□ -1.97
HCFC1P51610 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.74□□□□□ -1.97
HCFC1P51610 NPM1P49-201ENST00000448027 714 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 AC093392.2-201ENST00000450682 337 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 RN7SL442P-201ENST00000473804 320 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 RN7SL429P-201ENST00000479090 223 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 AC021382.1-201ENST00000483523 359 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 RN7SL489P-201ENST00000486185 223 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 RN7SL327P-201ENST00000488659 223 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 AC007182.2-201ENST00000489251 402 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 RPL9P6-201ENST00000492764 598 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.74□□□□□ -1.97
HCFC1P51610 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.74□□□□□ -1.97
HCFC1P51610 RNU6-445P-201ENST00000516949 107 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 AP003181.2-201ENST00000528941 181 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.74□□□□□ -1.97
HCFC1P51610 MTND1P15-201ENST00000579262 949 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 BX664608.1-201ENST00000610519 487 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 AL589743.7-201ENST00000612637 233 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 AC025594.3-201ENST00000613068 790 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 RN7SL853P-201ENST00000617250 223 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 MIR6130-201ENST00000619419 109 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.74□□□□□ -1.97
HCFC1P51610 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.74□□□□□ -1.97
HCFC1P51610 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.74□□□□□ -1.97
HCFC1P51610 MIR622-201ENST00000638396 96 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 AC138915.3-201ENST00000562908 1389 ntBASIC2.74□□□□□ -1.97
HCFC1P51610 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HCFC1P51610 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HCFC1P51610 RNU6-173P-201ENST00000364215 104 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 RNU6-108P-201ENST00000365558 107 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 MIR184-201ENST00000384962 84 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 SNORA48.8-201ENST00000391324 134 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 RPL23AP32-201ENST00000395315 459 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.73□□□□□ -1.97
HCFC1P51610 AL139095.1-201ENST00000404326 391 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 MTCYBP5-201ENST00000423752 1135 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.73□□□□□ -1.97
HCFC1P51610 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.73□□□□□ -1.97
HCFC1P51610 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.73□□□□□ -1.97
HCFC1P51610 AL022238.1-201ENST00000442557 355 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.73□□□□□ -1.97
HCFC1P51610 AC005297.2-201ENST00000450430 606 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.73□□□□□ -1.97
HCFC1P51610 HMGN1P18-201ENST00000457642 277 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
HCFC1P51610 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
HCFC1P51610 AC105914.1-201ENST00000511798 226 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.73□□□□□ -1.97
HCFC1P51610 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.73□□□□□ -1.97
HCFC1P51610 OR4P1P-201ENST00000530808 1136 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 ZNF519P2-201ENST00000557032 169 ntBASIC2.73□□□□□ -1.97
HCFC1P51610 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms