Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AC125336.1-201ENST00000508893 2827 ntBASIC6.5□□□□□ -1.37
PRIM1P49642 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PRIM1P49642 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PRIM1P49642 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
PRIM1P49642 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.5□□□□□ -1.37
PRIM1P49642 AL121839.2-201ENST00000565058 6943 ntBASIC6.5□□□□□ -1.37
PRIM1P49642 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PRIM1P49642 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.5□□□□□ -1.37
PRIM1P49642 RNU6-603P-201ENST00000411403 107 ntBASIC6.5□□□□□ -1.37
PRIM1P49642 AC063979.1-201ENST00000415539 377 ntBASIC6.5□□□□□ -1.37
PRIM1P49642 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC6.5□□□□□ -1.37
PRIM1P49642 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC6.5□□□□□ -1.37
PRIM1P49642 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC6.5□□□□□ -1.37
PRIM1P49642 RN7SL41P-201ENST00000476144 297 ntBASIC6.5□□□□□ -1.37
PRIM1P49642 AKIRIN2P1-201ENST00000505898 352 ntBASIC6.5□□□□□ -1.37
PRIM1P49642 SCARNA24.2-201ENST00000516968 130 ntBASIC6.5□□□□□ -1.37
PRIM1P49642 FKBP1BP1-201ENST00000553366 325 ntBASIC6.5□□□□□ -1.37
PRIM1P49642 RPL23AP87-202ENST00000573039 466 ntBASIC6.5□□□□□ -1.37
PRIM1P49642 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC6.5□□□□□ -1.37
PRIM1P49642 MIR6853-201ENST00000619642 74 ntBASIC6.5□□□□□ -1.37
PRIM1P49642 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC6.5□□□□□ -1.37
PRIM1P49642 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.5□□□□□ -1.37
PRIM1P49642 MIR6830-201ENST00000636015 70 ntBASIC6.5□□□□□ -1.37
PRIM1P49642 U6.106-201ENST00000636360 105 ntBASIC6.5□□□□□ -1.37
PRIM1P49642 U6.92-201ENST00000636464 89 ntBASIC6.5□□□□□ -1.37
PRIM1P49642 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
PRIM1P49642 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC6.5□□□□□ -1.37
PRIM1P49642 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PRIM1P49642 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PRIM1P49642 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC6.5□□□□□ -1.37
PRIM1P49642 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.49□□□□□ -1.37
PRIM1P49642 PRO1804-201ENST00000623780 2050 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 PHKBP1-201ENST00000450951 1951 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PRIM1P49642 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
PRIM1P49642 RNA5SP52-201ENST00000362448 134 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 Y_RNA.81-201ENST00000362997 102 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 SNORA2.3-201ENST00000383920 135 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 Y_RNA.541-201ENST00000384640 113 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 SNORA53-201ENST00000391141 249 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 MIR190B-201ENST00000401119 79 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.49□□□□□ -1.37
PRIM1P49642 RNA5SP494-201ENST00000410653 129 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 EI24P1-201ENST00000416584 867 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 PPP1R11P2-201ENST00000423543 382 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 AC073587.1-201ENST00000447093 876 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 RN7SKP122-201ENST00000515923 296 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 RNU7-200P-201ENST00000516105 62 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 RNA5SP392-201ENST00000516905 112 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 RNU6-840P-201ENST00000517275 65 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.49□□□□□ -1.37
PRIM1P49642 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
PRIM1P49642 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC6.49□□□□□ -1.37
PRIM1P49642 AC037487.3-201ENST00000606668 112 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.49□□□□□ -1.37
PRIM1P49642 AC021753.1-201ENST00000635724 168 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PRIM1P49642 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PRIM1P49642 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PRIM1P49642 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
PRIM1P49642 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PRIM1P49642 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PRIM1P49642 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
PRIM1P49642 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC6.49□□□□□ -1.37
PRIM1P49642 ZNF285B-201ENST00000561698 1767 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 AC100778.3-201ENST00000580060 1750 ntBASIC6.49□□□□□ -1.37
PRIM1P49642 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
PRIM1P49642 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
PRIM1P49642 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PRIM1P49642 AL672167.1-205ENST00000641112 3080 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.48□□□□□ -1.37
PRIM1P49642 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
PRIM1P49642 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PRIM1P49642 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PRIM1P49642 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PRIM1P49642 Y_RNA.16-201ENST00000362421 102 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 RNU6-290P-201ENST00000365212 101 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 SNORA70F-201ENST00000384142 135 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 Y_RNA.534-201ENST00000384599 112 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 RPL21P75-201ENST00000396599 483 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 RPL21P28-201ENST00000401418 483 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC6.48□□□□□ -1.37
PRIM1P49642 BX510359.2-201ENST00000417920 305 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC6.48□□□□□ -1.37
PRIM1P49642 AL590556.1-201ENST00000423231 483 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 AL732292.1-201ENST00000426692 226 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 LAMTOR3P1-201ENST00000428620 370 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.48□□□□□ -1.37
PRIM1P49642 RPL23AP1-201ENST00000428990 471 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PRIM1P49642 AC090774.1-201ENST00000435925 246 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 RPL10P17-201ENST00000453852 316 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 RPL21P11-201ENST00000461458 483 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 RPL21P39-201ENST00000463605 483 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 AC091021.1-201ENST00000468051 388 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 AC132942.1-201ENST00000486753 483 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 RN7SL814P-201ENST00000487715 300 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 AC093591.1-201ENST00000491435 481 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 RPL21P16-201ENST00000495531 483 ntBASIC6.48□□□□□ -1.37
PRIM1P49642 AC010469.2-201ENST00000496412 480 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms