Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.52□□□□□ -2.17
RPL28P46779 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.52□□□□□ -2.17
RPL28P46779 ATG12P2-201ENST00000456830 416 ntBASIC1.52□□□□□ -2.17
RPL28P46779 KLF3P2-201ENST00000465138 268 ntBASIC1.52□□□□□ -2.17
RPL28P46779 DYNLL1P5-201ENST00000467158 270 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.52□□□□□ -2.17
RPL28P46779 AC004924.1-201ENST00000480160 781 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.52□□□□□ -2.17
RPL28P46779 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.52□□□□□ -2.17
RPL28P46779 AC027338.1-201ENST00000514840 825 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.52□□□□□ -2.17
RPL28P46779 RN7SKP132-201ENST00000516001 208 ntBASIC1.52□□□□□ -2.17
RPL28P46779 RNU1-40P-201ENST00000516816 164 ntBASIC1.52□□□□□ -2.17
RPL28P46779 RNU1-97P-201ENST00000516872 164 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AC025755.1-201ENST00000521306 278 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.52□□□□□ -2.17
RPL28P46779 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.52□□□□□ -2.17
RPL28P46779 AC010186.2-204ENST00000537668 439 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.52□□□□□ -2.17
RPL28P46779 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.52□□□□□ -2.17
RPL28P46779 RPS3AP23-202ENST00000574601 686 ntBASIC1.52□□□□□ -2.17
RPL28P46779 MIR4448-201ENST00000584360 86 ntBASIC1.52□□□□□ -2.17
RPL28P46779 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.52□□□□□ -2.17
RPL28P46779 VN1R92P-201ENST00000598511 928 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AC008121.1-201ENST00000603244 268 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AP000403.1-201ENST00000603349 851 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AC007349.4-201ENST00000608114 532 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AP005229.2-201ENST00000609980 697 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AC013562.2-201ENST00000611632 603 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AC005332.6-201ENST00000613178 446 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.52□□□□□ -2.17
RPL28P46779 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.52□□□□□ -2.17
RPL28P46779 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RPL28P46779 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.52□□□□□ -2.17
RPL28P46779 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RPL28P46779 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
RPL28P46779 AL109809.4-201ENST00000603520 2185 ntBASIC1.51□□□□□ -2.17
RPL28P46779 AC004520.1-201ENST00000608362 1413 ntBASIC1.51□□□□□ -2.17
RPL28P46779 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RPL28P46779 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.51□□□□□ -2.17
RPL28P46779 RNU6-28P-201ENST00000362378 107 ntBASIC1.51□□□□□ -2.17
RPL28P46779 RNU6-884P-201ENST00000363889 107 ntBASIC1.51□□□□□ -2.17
RPL28P46779 Y_RNA.234-201ENST00000364409 97 ntBASIC1.51□□□□□ -2.17
RPL28P46779 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
RPL28P46779 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
RPL28P46779 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
RPL28P46779 RPL23AP29-201ENST00000397284 453 ntBASIC1.51□□□□□ -2.17
RPL28P46779 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
RPL28P46779 AL591416.1-201ENST00000404015 867 ntBASIC1.51□□□□□ -2.17
RPL28P46779 SNORD23.1-201ENST00000408212 104 ntBASIC1.51□□□□□ -2.17
RPL28P46779 TPMTP3-201ENST00000411928 735 ntBASIC1.51□□□□□ -2.17
RPL28P46779 BPY2DP-201ENST00000422208 265 ntBASIC1.51□□□□□ -2.17
RPL28P46779 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.51□□□□□ -2.17
RPL28P46779 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.51□□□□□ -2.17
RPL28P46779 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.51□□□□□ -2.17
RPL28P46779 AC244505.3-201ENST00000454598 187 ntBASIC1.51□□□□□ -2.17
RPL28P46779 RPL12P25-201ENST00000455592 494 ntBASIC1.51□□□□□ -2.17
RPL28P46779 AC090515.1-201ENST00000465295 476 ntBASIC1.51□□□□□ -2.17
RPL28P46779 AC108734.3-201ENST00000481241 1165 ntBASIC1.51□□□□□ -2.17
RPL28P46779 AC109486.1-201ENST00000486833 374 ntBASIC1.51□□□□□ -2.17
RPL28P46779 AC114981.1-201ENST00000503897 678 ntBASIC1.51□□□□□ -2.17
RPL28P46779 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.51□□□□□ -2.17
RPL28P46779 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.51□□□□□ -2.17
RPL28P46779 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.51□□□□□ -2.17
RPL28P46779 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
RPL28P46779 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.51□□□□□ -2.17
RPL28P46779 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.51□□□□□ -2.17
RPL28P46779 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.51□□□□□ -2.17
RPL28P46779 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.51□□□□□ -2.17
RPL28P46779 AC025588.2-201ENST00000604851 466 ntBASIC1.51□□□□□ -2.17
RPL28P46779 AC026790.2-201ENST00000606282 430 ntBASIC1.51□□□□□ -2.17
RPL28P46779 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.51□□□□□ -2.17
RPL28P46779 AL354696.1-201ENST00000614652 497 ntBASIC1.51□□□□□ -2.17
RPL28P46779 MIR6817-201ENST00000615588 66 ntBASIC1.51□□□□□ -2.17
RPL28P46779 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.51□□□□□ -2.17
RPL28P46779 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.51□□□□□ -2.17
RPL28P46779 AC007998.5-201ENST00000622938 237 ntBASIC1.51□□□□□ -2.17
RPL28P46779 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.51□□□□□ -2.17
RPL28P46779 AL163152.1-201ENST00000642001 374 ntBASIC1.51□□□□□ -2.17
RPL28P46779 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.51□□□□□ -2.17
RPL28P46779 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
RPL28P46779 AC016717.2-201ENST00000609089 5141 ntBASIC1.5□□□□□ -2.17
RPL28P46779 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
RPL28P46779 AC107982.1-201ENST00000507171 1300 ntBASIC1.5□□□□□ -2.17
RPL28P46779 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
RPL28P46779 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
RPL28P46779 RPS4XP8-201ENST00000402039 771 ntBASIC1.5□□□□□ -2.17
RPL28P46779 AL355497.1-201ENST00000406262 551 ntBASIC1.5□□□□□ -2.17
RPL28P46779 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.5□□□□□ -2.17
RPL28P46779 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.5□□□□□ -2.17
RPL28P46779 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.5□□□□□ -2.17
RPL28P46779 MTATP6P11-201ENST00000428071 670 ntBASIC1.5□□□□□ -2.17
RPL28P46779 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.5□□□□□ -2.17
RPL28P46779 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.5□□□□□ -2.17
RPL28P46779 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.5□□□□□ -2.17
RPL28P46779 RNU6-717P-201ENST00000459076 104 ntBASIC1.5□□□□□ -2.17
RPL28P46779 AL121769.1-201ENST00000469473 401 ntBASIC1.5□□□□□ -2.17
RPL28P46779 LINC00888-204ENST00000487386 421 ntBASIC1.5□□□□□ -2.17
RPL28P46779 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RPL28P46779 AC026414.1-201ENST00000504046 698 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms