Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNU2-37P-201ENST00000410695 177 ntBASIC0.97□□□□□ -2.25
HTTP42858 OR6C66P-201ENST00000414917 930 ntBASIC0.97□□□□□ -2.25
HTTP42858 AC099336.2-201ENST00000422457 254 ntBASIC0.97□□□□□ -2.25
HTTP42858 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.97□□□□□ -2.25
HTTP42858 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
HTTP42858 RNU6-222P-201ENST00000362438 107 ntBASIC0.96□□□□□ -2.26
HTTP42858 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.96□□□□□ -2.26
HTTP42858 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.96□□□□□ -2.26
HTTP42858 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.96□□□□□ -2.26
HTTP42858 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.96□□□□□ -2.26
HTTP42858 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.96□□□□□ -2.26
HTTP42858 AC005034.5-201ENST00000604219 466 ntBASIC0.96□□□□□ -2.26
HTTP42858 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
HTTP42858 CR382285.2-201ENST00000624662 1495 ntBASIC0.96□□□□□ -2.26
HTTP42858 HMGB3P31-201ENST00000413333 595 ntBASIC0.96□□□□□ -2.26
HTTP42858 IFNA20P-201ENST00000436840 528 ntBASIC0.96□□□□□ -2.26
HTTP42858 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.96□□□□□ -2.26
HTTP42858 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.96□□□□□ -2.26
HTTP42858 RPL21P39-201ENST00000463605 483 ntBASIC0.96□□□□□ -2.26
HTTP42858 AC008676.3-201ENST00000521237 435 ntBASIC0.96□□□□□ -2.26
HTTP42858 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC0.96□□□□□ -2.26
HTTP42858 MIR5589-201ENST00000579442 60 ntBASIC0.96□□□□□ -2.26
HTTP42858 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.96□□□□□ -2.26
HTTP42858 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.96□□□□□ -2.26
HTTP42858 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
HTTP42858 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
HTTP42858 MIR409-201ENST00000362237 79 ntBASIC0.95□□□□□ -2.26
HTTP42858 HMGB3P21-201ENST00000452483 547 ntBASIC0.95□□□□□ -2.26
HTTP42858 RPL9P9-202ENST00000466501 579 ntBASIC0.95□□□□□ -2.26
HTTP42858 AC005908.1-201ENST00000468701 347 ntBASIC0.95□□□□□ -2.26
HTTP42858 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.95□□□□□ -2.26
HTTP42858 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HTTP42858 RNA5SP295-201ENST00000362655 121 ntBASIC0.95□□□□□ -2.26
HTTP42858 RNU1-109P-201ENST00000383960 147 ntBASIC0.95□□□□□ -2.26
HTTP42858 RNU4-31P-201ENST00000384211 141 ntBASIC0.95□□□□□ -2.26
HTTP42858 RNU6-16P-201ENST00000384385 107 ntBASIC0.95□□□□□ -2.26
HTTP42858 AL139397.2-201ENST00000404529 772 ntBASIC0.95□□□□□ -2.26
HTTP42858 MIR1265-201ENST00000408444 86 ntBASIC0.95□□□□□ -2.26
HTTP42858 AC096751.1-202ENST00000502691 1067 ntBASIC0.95□□□□□ -2.26
HTTP42858 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.95□□□□□ -2.26
HTTP42858 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC0.95□□□□□ -2.26
HTTP42858 AP003117.1-201ENST00000602771 554 ntBASIC0.95□□□□□ -2.26
HTTP42858 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
HTTP42858 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.95□□□□□ -2.26
HTTP42858 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.95□□□□□ -2.26
HTTP42858 MIR514B-201ENST00000516774 80 ntBASIC0.95□□□□□ -2.26
HTTP42858 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
HTTP42858 RNU6-1235P-201ENST00000384559 107 ntBASIC0.94□□□□□ -2.26
HTTP42858 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.94□□□□□ -2.26
HTTP42858 RNA5SP310-201ENST00000459084 116 ntBASIC0.94□□□□□ -2.26
HTTP42858 SNORD97-201ENST00000459187 142 ntBASIC0.94□□□□□ -2.26
HTTP42858 RNU6-498P-201ENST00000459468 107 ntBASIC0.94□□□□□ -2.26
HTTP42858 AC092754.2-201ENST00000463506 460 ntBASIC0.94□□□□□ -2.26
HTTP42858 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
HTTP42858 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HTTP42858 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HTTP42858 AC022431.1-201ENST00000450941 438 ntBASIC0.94□□□□□ -2.26
HTTP42858 RPL7P18-201ENST00000478965 734 ntBASIC0.94□□□□□ -2.26
HTTP42858 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.94□□□□□ -2.26
HTTP42858 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.94□□□□□ -2.26
HTTP42858 SETP2-201ENST00000553886 926 ntBASIC0.94□□□□□ -2.26
HTTP42858 MIR3122-201ENST00000577243 73 ntBASIC0.94□□□□□ -2.26
HTTP42858 AC103710.2-202ENST00000641454 2853 ntBASIC0.94□□□□□ -2.26
HTTP42858 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.93□□□□□ -2.26
HTTP42858 Z75741.2-201ENST00000417272 1167 ntBASIC0.93□□□□□ -2.26
HTTP42858 ARF4P4-201ENST00000439608 520 ntBASIC0.93□□□□□ -2.26
HTTP42858 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.93□□□□□ -2.26
HTTP42858 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.93□□□□□ -2.26
HTTP42858 AC087465.1-201ENST00000560574 245 ntBASIC0.93□□□□□ -2.26
HTTP42858 AC010889.1-201ENST00000566193 2666 ntBASIC0.93□□□□□ -2.26
HTTP42858 RPL21P93-201ENST00000480465 489 ntBASIC0.93□□□□□ -2.26
HTTP42858 AC233702.1-201ENST00000482905 502 ntBASIC0.93□□□□□ -2.26
HTTP42858 AC093591.1-201ENST00000491435 481 ntBASIC0.93□□□□□ -2.26
HTTP42858 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
HTTP42858 SNORA6-201ENST00000384033 151 ntBASIC0.93□□□□□ -2.26
HTTP42858 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.93□□□□□ -2.26
HTTP42858 Z69720.2-201ENST00000624755 279 ntBASIC0.93□□□□□ -2.26
HTTP42858 OR4G3P-201ENST00000633500 913 ntBASIC0.93□□□□□ -2.26
HTTP42858 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.92□□□□□ -2.26
HTTP42858 SNORD14B-201ENST00000364533 90 ntBASIC0.92□□□□□ -2.26
HTTP42858 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HTTP42858 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
HTTP42858 UBE2V2P1-201ENST00000434717 398 ntBASIC0.92□□□□□ -2.26
HTTP42858 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.92□□□□□ -2.26
HTTP42858 AL133393.1-201ENST00000603277 287 ntBASIC0.92□□□□□ -2.26
HTTP42858 AC009452.1-201ENST00000640823 606 ntBASIC0.92□□□□□ -2.26
HTTP42858 RNU6-288P-201ENST00000363690 104 ntBASIC0.92□□□□□ -2.26
HTTP42858 RNA5SP499-201ENST00000363982 119 ntBASIC0.92□□□□□ -2.26
HTTP42858 UBE2V1P9-201ENST00000414760 368 ntBASIC0.92□□□□□ -2.26
HTTP42858 OR4R1P-201ENST00000529879 463 ntBASIC0.92□□□□□ -2.26
HTTP42858 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.92□□□□□ -2.26
HTTP42858 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.92□□□□□ -2.26
HTTP42858 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
HTTP42858 OR5AQ1P-203ENST00000641818 1529 ntBASIC0.91□□□□□ -2.26
HTTP42858 RNU6-234P-201ENST00000365229 104 ntBASIC0.91□□□□□ -2.26
HTTP42858 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.91□□□□□ -2.26
HTTP42858 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.91□□□□□ -2.26
HTTP42858 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC0.91□□□□□ -2.26
HTTP42858 MIR4636-201ENST00000582271 80 ntBASIC0.91□□□□□ -2.26
HTTP42858 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms