Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 OR5J1P-201ENST00000313544 939 ntBASIC2.91□□□□□ -1.94
SHC1P29353 RNA5SP387-201ENST00000364226 106 ntBASIC2.91□□□□□ -1.94
SHC1P29353 RNU6-853P-201ENST00000364306 107 ntBASIC2.91□□□□□ -1.94
SHC1P29353 SNORD82-201ENST00000365530 70 ntBASIC2.91□□□□□ -1.94
SHC1P29353 RNY3P14-201ENST00000384309 102 ntBASIC2.91□□□□□ -1.94
SHC1P29353 GSTA9P-201ENST00000406231 611 ntBASIC2.91□□□□□ -1.94
SHC1P29353 FCF1P10-201ENST00000407590 479 ntBASIC2.91□□□□□ -1.94
SHC1P29353 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.91□□□□□ -1.94
SHC1P29353 NDUFB4P5-201ENST00000415445 361 ntBASIC2.91□□□□□ -1.94
SHC1P29353 MTATP6P27-201ENST00000416987 621 ntBASIC2.91□□□□□ -1.94
SHC1P29353 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.91□□□□□ -1.94
SHC1P29353 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.91□□□□□ -1.94
SHC1P29353 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.91□□□□□ -1.94
SHC1P29353 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.91□□□□□ -1.94
SHC1P29353 AC079448.1-201ENST00000449377 373 ntBASIC2.91□□□□□ -1.94
SHC1P29353 RPS24P6-201ENST00000452670 400 ntBASIC2.91□□□□□ -1.94
SHC1P29353 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.91□□□□□ -1.94
SHC1P29353 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.91□□□□□ -1.94
SHC1P29353 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.91□□□□□ -1.94
SHC1P29353 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.91□□□□□ -1.94
SHC1P29353 AC104563.1-201ENST00000476147 376 ntBASIC2.91□□□□□ -1.94
SHC1P29353 AP001025.2-201ENST00000490908 477 ntBASIC2.91□□□□□ -1.94
SHC1P29353 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.91□□□□□ -1.94
SHC1P29353 HMGB1P22-201ENST00000505315 124 ntBASIC2.91□□□□□ -1.94
SHC1P29353 HMGB3P15-201ENST00000507326 574 ntBASIC2.91□□□□□ -1.94
SHC1P29353 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
SHC1P29353 RNU6-1178P-201ENST00000516674 107 ntBASIC2.91□□□□□ -1.94
SHC1P29353 RNU6-714P-201ENST00000516963 103 ntBASIC2.91□□□□□ -1.94
SHC1P29353 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.91□□□□□ -1.94
SHC1P29353 RNU6-201P-201ENST00000517100 61 ntBASIC2.91□□□□□ -1.94
SHC1P29353 NRON-201ENST00000517270 370 ntBASIC2.91□□□□□ -1.94
SHC1P29353 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.91□□□□□ -1.94
SHC1P29353 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.91□□□□□ -1.94
SHC1P29353 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.91□□□□□ -1.94
SHC1P29353 AC123904.2-201ENST00000548059 300 ntBASIC2.91□□□□□ -1.94
SHC1P29353 RPS3AP4-201ENST00000555161 764 ntBASIC2.91□□□□□ -1.94
SHC1P29353 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.91□□□□□ -1.94
SHC1P29353 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.91□□□□□ -1.94
SHC1P29353 AL355812.1-201ENST00000603215 216 ntBASIC2.91□□□□□ -1.94
SHC1P29353 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.91□□□□□ -1.94
SHC1P29353 AL157817.1-201ENST00000614264 790 ntBASIC2.91□□□□□ -1.94
SHC1P29353 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.91□□□□□ -1.94
SHC1P29353 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.91□□□□□ -1.94
SHC1P29353 AC072046.2-201ENST00000618366 268 ntBASIC2.91□□□□□ -1.94
SHC1P29353 PISRT1-201ENST00000626175 531 ntBASIC2.91□□□□□ -1.94
SHC1P29353 MIR6863-201ENST00000636112 90 ntBASIC2.91□□□□□ -1.94
SHC1P29353 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.91□□□□□ -1.94
SHC1P29353 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
SHC1P29353 ELF2P3-201ENST00000445099 1506 ntBASIC2.91□□□□□ -1.94
SHC1P29353 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
SHC1P29353 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SHC1P29353 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SHC1P29353 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.91□□□□□ -1.94
SHC1P29353 AC092125.1-201ENST00000562568 1995 ntBASIC2.91□□□□□ -1.94
SHC1P29353 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SHC1P29353 AC093831.2-201ENST00000624393 3427 ntBASIC2.9□□□□□ -1.94
SHC1P29353 AF117829.1-206ENST00000621883 3802 ntBASIC2.9□□□□□ -1.94
SHC1P29353 AC097714.1-201ENST00000511272 1647 ntBASIC2.9□□□□□ -1.94
SHC1P29353 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SHC1P29353 MTND5P1-201ENST00000445440 1375 ntBASIC2.9□□□□□ -1.94
SHC1P29353 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHC1P29353 RNU6-263P-201ENST00000363811 107 ntBASIC2.9□□□□□ -1.95
SHC1P29353 Y_RNA.256-201ENST00000364594 104 ntBASIC2.9□□□□□ -1.95
SHC1P29353 Y_RNA.296-201ENST00000364930 108 ntBASIC2.9□□□□□ -1.95
SHC1P29353 Y_RNA.372-201ENST00000365599 102 ntBASIC2.9□□□□□ -1.95
SHC1P29353 Y_RNA.390-201ENST00000383932 102 ntBASIC2.9□□□□□ -1.95
SHC1P29353 RNU6-629P-201ENST00000384061 103 ntBASIC2.9□□□□□ -1.95
SHC1P29353 AL356421.1-201ENST00000403255 413 ntBASIC2.9□□□□□ -1.95
SHC1P29353 CCNG1P1-201ENST00000406783 885 ntBASIC2.9□□□□□ -1.95
SHC1P29353 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.9□□□□□ -1.95
SHC1P29353 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.9□□□□□ -1.95
SHC1P29353 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.9□□□□□ -1.95
SHC1P29353 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.9□□□□□ -1.95
SHC1P29353 MTND1P2-201ENST00000430604 821 ntBASIC2.9□□□□□ -1.95
SHC1P29353 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.9□□□□□ -1.95
SHC1P29353 NEK4P1-201ENST00000433383 879 ntBASIC2.9□□□□□ -1.95
SHC1P29353 PSPHP1-201ENST00000450062 261 ntBASIC2.9□□□□□ -1.95
SHC1P29353 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.9□□□□□ -1.95
SHC1P29353 AC013267.1-201ENST00000458227 267 ntBASIC2.9□□□□□ -1.95
SHC1P29353 RPS3AP14-201ENST00000483907 780 ntBASIC2.9□□□□□ -1.95
SHC1P29353 RN7SL504P-201ENST00000494496 287 ntBASIC2.9□□□□□ -1.95
SHC1P29353 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.9□□□□□ -1.95
SHC1P29353 AC116353.2-201ENST00000505332 712 ntBASIC2.9□□□□□ -1.95
SHC1P29353 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.9□□□□□ -1.95
SHC1P29353 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.9□□□□□ -1.95
SHC1P29353 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.9□□□□□ -1.95
SHC1P29353 MTCO3P44-201ENST00000510977 541 ntBASIC2.9□□□□□ -1.95
SHC1P29353 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.9□□□□□ -1.95
SHC1P29353 FAM92A1P1-201ENST00000528023 890 ntBASIC2.9□□□□□ -1.95
SHC1P29353 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.9□□□□□ -1.95
SHC1P29353 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.9□□□□□ -1.95
SHC1P29353 SYF2P1-201ENST00000550658 413 ntBASIC2.9□□□□□ -1.95
SHC1P29353 OR4H12P-201ENST00000556269 907 ntBASIC2.9□□□□□ -1.95
SHC1P29353 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.9□□□□□ -1.95
SHC1P29353 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.9□□□□□ -1.95
SHC1P29353 AL391840.1-201ENST00000571144 367 ntBASIC2.9□□□□□ -1.95
SHC1P29353 AC034268.2-201ENST00000571784 482 ntBASIC2.9□□□□□ -1.95
SHC1P29353 MIR3118-1-201ENST00000581787 76 ntBASIC2.9□□□□□ -1.95
SHC1P29353 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.9□□□□□ -1.95
SHC1P29353 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms