Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.76□□□□□ -1.97
PTPN6P29350 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN6P29350 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.76□□□□□ -1.97
PTPN6P29350 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.76□□□□□ -1.97
PTPN6P29350 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN6P29350 AL049873.1-201ENST00000480540 376 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 OR2A20P-203ENST00000498397 1268 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 CDC42P4-201ENST00000510507 563 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 RNU6-390P-201ENST00000516259 103 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 RN7SKP272-201ENST00000516988 232 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 NRON-201ENST00000517270 370 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 AC009812.2-201ENST00000517657 457 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 AC087276.1-201ENST00000529659 480 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PTPN6P29350 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PTPN6P29350 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PTPN6P29350 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN6P29350 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN6P29350 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.76□□□□□ -1.97
PTPN6P29350 TRAV28-201ENST00000557548 323 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 AC090888.2-201ENST00000559765 1144 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 H3F3AP1-201ENST00000559984 334 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 AC009097.3-201ENST00000563557 1018 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN6P29350 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PTPN6P29350 MIR4999-201ENST00000585029 91 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 AC234772.3-201ENST00000602277 528 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 AC021171.1-201ENST00000603137 706 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 AL161729.4-201ENST00000604650 476 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.76□□□□□ -1.97
PTPN6P29350 AC107871.2-201ENST00000612894 502 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 ATP5A1P2-202ENST00000616464 443 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 AC010338.1-201ENST00000621823 717 ntBASIC2.76□□□□□ -1.97
PTPN6P29350 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.76□□□□□ -1.97
PTPN6P29350 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PTPN6P29350 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PTPN6P29350 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PTPN6P29350 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.75□□□□□ -1.97
PTPN6P29350 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PTPN6P29350 RNU6-1200P-201ENST00000384162 107 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 RNU6-769P-201ENST00000384407 104 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PTPN6P29350 RSL24D1P4-201ENST00000400938 484 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 MIR887-201ENST00000401258 79 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN6P29350 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN6P29350 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.75□□□□□ -1.97
PTPN6P29350 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN6P29350 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.75□□□□□ -1.97
PTPN6P29350 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.75□□□□□ -1.97
PTPN6P29350 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.75□□□□□ -1.97
PTPN6P29350 AC093156.1-201ENST00000440382 670 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 AL831737.1-201ENST00000441288 271 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 MTCO3P45-201ENST00000443036 613 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.75□□□□□ -1.97
PTPN6P29350 DDX3P2-201ENST00000446138 111 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 NANOGNBP1-201ENST00000448444 480 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.75□□□□□ -1.97
PTPN6P29350 AC008481.1-201ENST00000463278 396 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 AP001486.1-201ENST00000463339 476 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 AC011825.1-201ENST00000484967 388 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.75□□□□□ -1.97
PTPN6P29350 HSPE1P23-201ENST00000509838 286 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 LTV1P1-201ENST00000510683 1237 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.75□□□□□ -1.97
PTPN6P29350 RN7SKP265-201ENST00000516448 223 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 AP001372.4-201ENST00000524889 472 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 AC007536.1-201ENST00000533382 349 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.75□□□□□ -1.97
PTPN6P29350 AL451007.1-201ENST00000595491 289 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 AC015871.2-201ENST00000603605 948 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 RPL23AP88-201ENST00000605759 454 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 AC007038.2-201ENST00000608095 740 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 AP000240.1-201ENST00000609910 452 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 UCA1.1-201ENST00000620952 75 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 AC007490.1-201ENST00000624321 703 ntBASIC2.75□□□□□ -1.97
PTPN6P29350 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.75□□□□□ -1.97
PTPN6P29350 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PTPN6P29350 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
PTPN6P29350 MTND4P16-201ENST00000466108 1367 ntBASIC2.74□□□□□ -1.97
PTPN6P29350 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.74□□□□□ -1.97
PTPN6P29350 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PTPN6P29350 CR848007.1-201ENST00000442354 1699 ntBASIC2.74□□□□□ -1.97
PTPN6P29350 Y_RNA.302-201ENST00000364997 102 ntBASIC2.74□□□□□ -1.97
PTPN6P29350 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PTPN6P29350 AC119751.3-201ENST00000399720 670 ntBASIC2.74□□□□□ -1.97
PTPN6P29350 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.74□□□□□ -1.97
PTPN6P29350 RNA5SP344-201ENST00000411081 104 ntBASIC2.74□□□□□ -1.97
PTPN6P29350 AL513331.1-201ENST00000411908 397 ntBASIC2.74□□□□□ -1.97
PTPN6P29350 RPL21P24-201ENST00000413752 448 ntBASIC2.74□□□□□ -1.97
PTPN6P29350 BX682237.1-201ENST00000415016 335 ntBASIC2.74□□□□□ -1.97
PTPN6P29350 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.74□□□□□ -1.97
PTPN6P29350 HIGD1AP15-201ENST00000416198 280 ntBASIC2.74□□□□□ -1.97
PTPN6P29350 AL451054.2-201ENST00000420896 202 ntBASIC2.74□□□□□ -1.97
PTPN6P29350 RPL35AP12-201ENST00000425362 338 ntBASIC2.74□□□□□ -1.97
PTPN6P29350 MTND1P20-201ENST00000430341 950 ntBASIC2.74□□□□□ -1.97
PTPN6P29350 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.74□□□□□ -1.97
PTPN6P29350 RPS20P22-201ENST00000473700 357 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms