Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AC010587.1-201ENST00000505809 469 ntBASIC4.38□□□□□ -1.71
ATF3P18847 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.38□□□□□ -1.71
ATF3P18847 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.38□□□□□ -1.71
ATF3P18847 AC123904.3-201ENST00000547218 814 ntBASIC4.38□□□□□ -1.71
ATF3P18847 SYF2P1-201ENST00000550658 413 ntBASIC4.38□□□□□ -1.71
ATF3P18847 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.38□□□□□ -1.71
ATF3P18847 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.38□□□□□ -1.71
ATF3P18847 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.38□□□□□ -1.71
ATF3P18847 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.38□□□□□ -1.71
ATF3P18847 HMGB1P6-201ENST00000569046 646 ntBASIC4.38□□□□□ -1.71
ATF3P18847 RPL23AP84-201ENST00000571193 464 ntBASIC4.38□□□□□ -1.71
ATF3P18847 MIR4293-201ENST00000584305 78 ntBASIC4.38□□□□□ -1.71
ATF3P18847 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.38□□□□□ -1.71
ATF3P18847 AC106900.2-201ENST00000604994 317 ntBASIC4.38□□□□□ -1.71
ATF3P18847 AC006566.1-201ENST00000608943 513 ntBASIC4.38□□□□□ -1.71
ATF3P18847 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.38□□□□□ -1.71
ATF3P18847 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
ATF3P18847 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATF3P18847 AC017071.1-201ENST00000564407 2204 ntBASIC4.38□□□□□ -1.71
ATF3P18847 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATF3P18847 MTND4P26-201ENST00000415971 1359 ntBASIC4.38□□□□□ -1.71
ATF3P18847 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATF3P18847 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATF3P18847 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.38□□□□□ -1.71
ATF3P18847 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATF3P18847 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATF3P18847 AC062016.1-201ENST00000355719 319 ntBASIC4.37□□□□□ -1.71
ATF3P18847 RNU6-1284P-201ENST00000363701 100 ntBASIC4.37□□□□□ -1.71
ATF3P18847 RNU6-283P-201ENST00000364788 107 ntBASIC4.37□□□□□ -1.71
ATF3P18847 Y_RNA.359-201ENST00000365498 102 ntBASIC4.37□□□□□ -1.71
ATF3P18847 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATF3P18847 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
ATF3P18847 Y_RNA.559-201ENST00000384686 107 ntBASIC4.37□□□□□ -1.71
ATF3P18847 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.37□□□□□ -1.71
ATF3P18847 AC018630.2-202ENST00000422992 927 ntBASIC4.37□□□□□ -1.71
ATF3P18847 AC137499.1-201ENST00000427602 88 ntBASIC4.37□□□□□ -1.71
ATF3P18847 RPL7L1P10-201ENST00000427790 463 ntBASIC4.37□□□□□ -1.71
ATF3P18847 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.37□□□□□ -1.71
ATF3P18847 USP12PX-201ENST00000432383 1057 ntBASIC4.37□□□□□ -1.71
ATF3P18847 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.37□□□□□ -1.71
ATF3P18847 AC108938.1-201ENST00000451204 136 ntBASIC4.37□□□□□ -1.71
ATF3P18847 KLF3P2-201ENST00000465138 268 ntBASIC4.37□□□□□ -1.71
ATF3P18847 SNRPGP3-201ENST00000469405 227 ntBASIC4.37□□□□□ -1.71
ATF3P18847 HMGB3P15-201ENST00000507326 574 ntBASIC4.37□□□□□ -1.71
ATF3P18847 RNU1-61P-201ENST00000516107 151 ntBASIC4.37□□□□□ -1.71
ATF3P18847 RN7SKP272-201ENST00000516988 232 ntBASIC4.37□□□□□ -1.71
ATF3P18847 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.37□□□□□ -1.71
ATF3P18847 FAM60DP-201ENST00000524174 632 ntBASIC4.37□□□□□ -1.71
ATF3P18847 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATF3P18847 RFPL1S-203ENST00000539579 330 ntBASIC4.37□□□□□ -1.71
ATF3P18847 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.37□□□□□ -1.71
ATF3P18847 MIR4528-201ENST00000577763 90 ntBASIC4.37□□□□□ -1.71
ATF3P18847 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.37□□□□□ -1.71
ATF3P18847 AC103987.3-201ENST00000582071 292 ntBASIC4.37□□□□□ -1.71
ATF3P18847 AC015871.2-201ENST00000603605 948 ntBASIC4.37□□□□□ -1.71
ATF3P18847 AC012531.5-201ENST00000611375 151 ntBASIC4.37□□□□□ -1.71
ATF3P18847 AL110115.1-201ENST00000614396 364 ntBASIC4.37□□□□□ -1.71
ATF3P18847 SDR42E1P2-201ENST00000614861 481 ntBASIC4.37□□□□□ -1.71
ATF3P18847 AL158196.1-201ENST00000616786 434 ntBASIC4.37□□□□□ -1.71
ATF3P18847 AC139792.2-201ENST00000624218 587 ntBASIC4.37□□□□□ -1.71
ATF3P18847 AL136313.1-201ENST00000624804 202 ntBASIC4.37□□□□□ -1.71
ATF3P18847 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATF3P18847 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATF3P18847 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.37□□□□□ -1.71
ATF3P18847 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
ATF3P18847 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.36□□□□□ -1.71
ATF3P18847 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
ATF3P18847 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.36□□□□□ -1.71
ATF3P18847 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.36□□□□□ -1.71
ATF3P18847 RNU5E-1-201ENST00000362477 120 ntBASIC4.36□□□□□ -1.71
ATF3P18847 RPS4XP8-201ENST00000402039 771 ntBASIC4.36□□□□□ -1.71
ATF3P18847 RNA5SP229-201ENST00000410809 99 ntBASIC4.36□□□□□ -1.71
ATF3P18847 C1DP2-201ENST00000418167 426 ntBASIC4.36□□□□□ -1.71
ATF3P18847 YPEL5P1-201ENST00000419731 367 ntBASIC4.36□□□□□ -1.71
ATF3P18847 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.36□□□□□ -1.71
ATF3P18847 AL356867.1-201ENST00000429623 299 ntBASIC4.36□□□□□ -1.71
ATF3P18847 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.36□□□□□ -1.71
ATF3P18847 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.36□□□□□ -1.71
ATF3P18847 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.36□□□□□ -1.71
ATF3P18847 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.36□□□□□ -1.71
ATF3P18847 AC106872.2-201ENST00000494303 480 ntBASIC4.36□□□□□ -1.71
ATF3P18847 AC068305.1-201ENST00000497406 726 ntBASIC4.36□□□□□ -1.71
ATF3P18847 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.36□□□□□ -1.71
ATF3P18847 YWHAEP4-201ENST00000505390 198 ntBASIC4.36□□□□□ -1.71
ATF3P18847 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.36□□□□□ -1.71
ATF3P18847 VWA8P1-201ENST00000510889 176 ntBASIC4.36□□□□□ -1.71
ATF3P18847 RNA5SP337-201ENST00000517007 109 ntBASIC4.36□□□□□ -1.71
ATF3P18847 AC011979.2-201ENST00000527568 352 ntBASIC4.36□□□□□ -1.71
ATF3P18847 AC091544.4-201ENST00000555268 342 ntBASIC4.36□□□□□ -1.71
ATF3P18847 AL355836.1-201ENST00000555951 870 ntBASIC4.36□□□□□ -1.71
ATF3P18847 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.36□□□□□ -1.71
ATF3P18847 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.36□□□□□ -1.71
ATF3P18847 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.36□□□□□ -1.71
ATF3P18847 AP000254.1-201ENST00000609934 520 ntBASIC4.36□□□□□ -1.71
ATF3P18847 HULC.1-201ENST00000612720 240 ntBASIC4.36□□□□□ -1.71
ATF3P18847 uc_338.25-201ENST00000613756 156 ntBASIC4.36□□□□□ -1.71
ATF3P18847 AC010133.1-201ENST00000615809 842 ntBASIC4.36□□□□□ -1.71
ATF3P18847 AC006338.1-201ENST00000618453 749 ntBASIC4.36□□□□□ -1.71
ATF3P18847 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.36□□□□□ -1.71
ATF3P18847 AC110994.2-201ENST00000635481 492 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms