Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN1P18031 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PTPN1P18031 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN1P18031 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PTPN1P18031 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PTPN1P18031 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN1P18031 RNA5SP515-201ENST00000364570 118 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 SNORD42.2-201ENST00000365570 69 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN1P18031 AC074085.1-201ENST00000413598 418 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 PPP1R11P2-201ENST00000423543 382 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN1P18031 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN1P18031 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN1P18031 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN1P18031 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.39□□□□□ -1.71
PTPN1P18031 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 Y_RNA.639-201ENST00000458981 102 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 TRBV1-201ENST00000476502 284 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN1P18031 PPBPP1-201ENST00000510807 373 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 RPL39P5-202ENST00000512505 151 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN1P18031 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN1P18031 RNU6-327P-201ENST00000516270 127 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 RNU6-1045P-201ENST00000516321 107 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 RNU6-566P-201ENST00000516790 107 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 AC106782.4-201ENST00000568264 210 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 RPL23AP84-201ENST00000571193 464 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN1P18031 MIR3171-201ENST00000584270 74 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 AC104662.1-201ENST00000604448 511 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 AC010680.4-201ENST00000605334 543 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 AL627309.6-201ENST00000606857 840 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 AC064801.1-201ENST00000612025 407 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN1P18031 MIR7151-201ENST00000617477 60 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 AC103705.1-201ENST00000619013 241 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 AL359757.2-201ENST00000624309 274 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN1P18031 MIR4275-201ENST00000636486 87 ntBASIC4.39□□□□□ -1.71
PTPN1P18031 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PTPN1P18031 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN1P18031 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN1P18031 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN1P18031 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN1P18031 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN1P18031 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 AL049555.1-201ENST00000562834 1933 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPN1P18031 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN1P18031 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN1P18031 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPN1P18031 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN1P18031 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN1P18031 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PTPN1P18031 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PTPN1P18031 MIR448-201ENST00000362131 111 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 SNORA4.3-201ENST00000365564 137 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PTPN1P18031 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN1P18031 RNY4P36-201ENST00000391116 96 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 RN7SKP158-201ENST00000410453 326 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 AC005019.1-201ENST00000436455 431 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPN1P18031 RPL7P43-201ENST00000478876 753 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 AC027575.1-201ENST00000481064 460 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 AC106872.2-201ENST00000494303 480 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.38□□□□□ -1.71
PTPN1P18031 HIGD1AP13-201ENST00000509878 289 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPN1P18031 RNU6-256P-201ENST00000516747 97 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 MIR2116-201ENST00000517221 80 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 AP006587.4-201ENST00000526053 529 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN1P18031 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN1P18031 MIR4790-201ENST00000577799 79 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 MIR7702-201ENST00000621931 59 ntBASIC4.38□□□□□ -1.71
PTPN1P18031 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PTPN1P18031 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPN1P18031 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPN1P18031 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PTPN1P18031 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTPN1P18031 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTPN1P18031 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPN1P18031 SPRR2C-201ENST00000290702 219 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 MIR369-201ENST00000362155 70 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 RNA5SP219-201ENST00000390940 113 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 AL583834.1-201ENST00000406943 343 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 MIR1193-201ENST00000408109 78 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 SNORA11-201ENST00000408789 128 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 RPL37P10-201ENST00000412884 288 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPN1P18031 AL139396.1-201ENST00000421137 167 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPN1P18031 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPN1P18031 NEFMP1-201ENST00000443423 1006 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 HSFY6P-201ENST00000445573 403 ntBASIC4.37□□□□□ -1.71
PTPN1P18031 RPS11P1-201ENST00000451072 473 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms