Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC010285.1-201ENST00000470580 392 ntBASIC1.95□□□□□ -2.1
CFTRP13569 AC087343.1-201ENST00000477341 475 ntBASIC1.95□□□□□ -2.1
CFTRP13569 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.95□□□□□ -2.1
CFTRP13569 AC092902.1-201ENST00000486999 259 ntBASIC1.95□□□□□ -2.1
CFTRP13569 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.95□□□□□ -2.1
CFTRP13569 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.95□□□□□ -2.1
CFTRP13569 COX6CP3-201ENST00000580869 223 ntBASIC1.95□□□□□ -2.1
CFTRP13569 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.95□□□□□ -2.1
CFTRP13569 AL445493.3-201ENST00000619568 477 ntBASIC1.95□□□□□ -2.1
CFTRP13569 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.95□□□□□ -2.1
CFTRP13569 AC099654.7-201ENST00000635788 2127 ntBASIC1.95□□□□□ -2.1
CFTRP13569 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.95□□□□□ -2.1
CFTRP13569 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CFTRP13569 RNA5SP139-201ENST00000364340 117 ntBASIC1.94□□□□□ -2.1
CFTRP13569 RNU4-41P-201ENST00000364426 143 ntBASIC1.94□□□□□ -2.1
CFTRP13569 MIR627-201ENST00000384979 97 ntBASIC1.94□□□□□ -2.1
CFTRP13569 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.94□□□□□ -2.1
CFTRP13569 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.94□□□□□ -2.1
CFTRP13569 PGBD4P3-201ENST00000440731 581 ntBASIC1.94□□□□□ -2.1
CFTRP13569 AC108059.3-201ENST00000456388 214 ntBASIC1.94□□□□□ -2.1
CFTRP13569 MTND3P24-201ENST00000506306 329 ntBASIC1.94□□□□□ -2.1
CFTRP13569 AC004062.1-201ENST00000509926 645 ntBASIC1.94□□□□□ -2.1
CFTRP13569 CDC42P4-201ENST00000510507 563 ntBASIC1.94□□□□□ -2.1
CFTRP13569 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.94□□□□□ -2.1
CFTRP13569 AC090821.2-201ENST00000523552 176 ntBASIC1.94□□□□□ -2.1
CFTRP13569 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.94□□□□□ -2.1
CFTRP13569 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.94□□□□□ -2.1
CFTRP13569 MTCO2P22-201ENST00000603246 681 ntBASIC1.94□□□□□ -2.1
CFTRP13569 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.94□□□□□ -2.1
CFTRP13569 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.94□□□□□ -2.1
CFTRP13569 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.94□□□□□ -2.1
CFTRP13569 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.94□□□□□ -2.1
CFTRP13569 Y_RNA.62-201ENST00000362840 99 ntBASIC1.94□□□□□ -2.1
CFTRP13569 Y_RNA.205-201ENST00000364128 113 ntBASIC1.94□□□□□ -2.1
CFTRP13569 RNU6-244P-201ENST00000391028 104 ntBASIC1.94□□□□□ -2.1
CFTRP13569 MIR1250-201ENST00000408098 113 ntBASIC1.94□□□□□ -2.1
CFTRP13569 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.94□□□□□ -2.1
CFTRP13569 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
CFTRP13569 SNORA31.16-201ENST00000516773 139 ntBASIC1.94□□□□□ -2.1
CFTRP13569 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.94□□□□□ -2.1
CFTRP13569 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.94□□□□□ -2.1
CFTRP13569 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.94□□□□□ -2.1
CFTRP13569 AC135776.4-201ENST00000624300 1904 ntBASIC1.94□□□□□ -2.1
CFTRP13569 AC111188.2-201ENST00000529697 1387 ntBASIC1.93□□□□□ -2.1
CFTRP13569 ERHP2-201ENST00000402323 299 ntBASIC1.93□□□□□ -2.1
CFTRP13569 AIMP1P2-201ENST00000425294 312 ntBASIC1.93□□□□□ -2.1
CFTRP13569 AC096632.1-201ENST00000427395 310 ntBASIC1.93□□□□□ -2.1
CFTRP13569 Z77249.1-201ENST00000444622 1175 ntBASIC1.93□□□□□ -2.1
CFTRP13569 AL136380.1-201ENST00000447970 162 ntBASIC1.93□□□□□ -2.1
CFTRP13569 MIR98-201ENST00000606724 119 ntBASIC1.93□□□□□ -2.1
CFTRP13569 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CFTRP13569 AC131280.1-202ENST00000624067 4211 ntBASIC1.93□□□□□ -2.1
CFTRP13569 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.92□□□□□ -2.1
CFTRP13569 Y_RNA.393-201ENST00000383936 102 ntBASIC1.92□□□□□ -2.1
CFTRP13569 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CFTRP13569 UBE2V1P6-201ENST00000430840 422 ntBASIC1.92□□□□□ -2.1
CFTRP13569 RPL30P12-201ENST00000474666 353 ntBASIC1.92□□□□□ -2.1
CFTRP13569 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.92□□□□□ -2.1
CFTRP13569 HMGB3P3-201ENST00000510526 400 ntBASIC1.92□□□□□ -2.1
CFTRP13569 AC105914.1-201ENST00000511798 226 ntBASIC1.92□□□□□ -2.1
CFTRP13569 OR5AQ1P-201ENST00000527596 927 ntBASIC1.92□□□□□ -2.1
CFTRP13569 AC008739.2-201ENST00000597006 317 ntBASIC1.92□□□□□ -2.1
CFTRP13569 AC006338.1-201ENST00000618453 749 ntBASIC1.92□□□□□ -2.1
CFTRP13569 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.92□□□□□ -2.1
CFTRP13569 ZNF37BP-203ENST00000452306 1352 ntBASIC1.92□□□□□ -2.1
CFTRP13569 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CFTRP13569 TXNP7-201ENST00000406296 293 ntBASIC1.91□□□□□ -2.1
CFTRP13569 AL049737.1-201ENST00000413920 1403 ntBASIC1.91□□□□□ -2.1
CFTRP13569 CYCSP33-201ENST00000414485 327 ntBASIC1.91□□□□□ -2.1
CFTRP13569 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CFTRP13569 RFC5P1-201ENST00000454419 874 ntBASIC1.91□□□□□ -2.1
CFTRP13569 snoU13.7-201ENST00000459220 104 ntBASIC1.91□□□□□ -2.1
CFTRP13569 AC015908.1-201ENST00000478739 476 ntBASIC1.91□□□□□ -2.1
CFTRP13569 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.91□□□□□ -2.1
CFTRP13569 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.91□□□□□ -2.1
CFTRP13569 MIR6076-201ENST00000617521 113 ntBASIC1.91□□□□□ -2.1
CFTRP13569 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
CFTRP13569 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CFTRP13569 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CFTRP13569 SNORA6-201ENST00000384033 151 ntBASIC1.9□□□□□ -2.11
CFTRP13569 AC016769.3-201ENST00000396562 315 ntBASIC1.9□□□□□ -2.11
CFTRP13569 RPL26P37-201ENST00000411983 438 ntBASIC1.9□□□□□ -2.11
CFTRP13569 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.9□□□□□ -2.11
CFTRP13569 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.9□□□□□ -2.11
CFTRP13569 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.9□□□□□ -2.11
CFTRP13569 snoU13.4-201ENST00000458916 104 ntBASIC1.9□□□□□ -2.11
CFTRP13569 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.9□□□□□ -2.11
CFTRP13569 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
CFTRP13569 SNORA31.20-201ENST00000517111 133 ntBASIC1.9□□□□□ -2.11
CFTRP13569 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.9□□□□□ -2.11
CFTRP13569 MIR548Y-201ENST00000582739 110 ntBASIC1.9□□□□□ -2.11
CFTRP13569 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.9□□□□□ -2.11
CFTRP13569 AC211469.2-201ENST00000605461 205 ntBASIC1.9□□□□□ -2.11
CFTRP13569 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CFTRP13569 AC079597.1-201ENST00000624306 508 ntBASIC1.9□□□□□ -2.11
CFTRP13569 MIR203B-201ENST00000636080 86 ntBASIC1.9□□□□□ -2.11
CFTRP13569 U3.40-201ENST00000408706 208 ntBASIC1.89□□□□□ -2.11
CFTRP13569 AC096533.1-201ENST00000411645 353 ntBASIC1.89□□□□□ -2.11
CFTRP13569 AC074117.2-201ENST00000417130 397 ntBASIC1.89□□□□□ -2.11
CFTRP13569 Z75741.2-201ENST00000417272 1167 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms