Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.82□□□□□ -1.96
TOP1P11387 Z75741.2-201ENST00000417272 1167 ntBASIC2.82□□□□□ -1.96
TOP1P11387 CR769776.1-201ENST00000441254 787 ntBASIC2.82□□□□□ -1.96
TOP1P11387 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.82□□□□□ -1.96
TOP1P11387 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.82□□□□□ -1.96
TOP1P11387 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.82□□□□□ -1.96
TOP1P11387 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.82□□□□□ -1.96
TOP1P11387 AC005410.1-202ENST00000460347 485 ntBASIC2.82□□□□□ -1.96
TOP1P11387 AC114322.1-201ENST00000506771 926 ntBASIC2.82□□□□□ -1.96
TOP1P11387 MRPS36P3-201ENST00000519284 130 ntBASIC2.82□□□□□ -1.96
TOP1P11387 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.82□□□□□ -1.96
TOP1P11387 HSPA8P13-201ENST00000523715 472 ntBASIC2.82□□□□□ -1.96
TOP1P11387 MIR3912-201ENST00000577566 105 ntBASIC2.82□□□□□ -1.96
TOP1P11387 AC090616.3-201ENST00000582184 217 ntBASIC2.82□□□□□ -1.96
TOP1P11387 AC107952.2-201ENST00000606048 486 ntBASIC2.82□□□□□ -1.96
TOP1P11387 AC103810.6-201ENST00000606708 136 ntBASIC2.82□□□□□ -1.96
TOP1P11387 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TOP1P11387 AL450472.3-201ENST00000615578 367 ntBASIC2.82□□□□□ -1.96
TOP1P11387 MIR6130-201ENST00000619419 109 ntBASIC2.82□□□□□ -1.96
TOP1P11387 OR1S1-201ENST00000624470 978 ntBASIC2.82□□□□□ -1.96
TOP1P11387 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.82□□□□□ -1.96
TOP1P11387 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.82□□□□□ -1.96
TOP1P11387 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.82□□□□□ -1.96
TOP1P11387 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TOP1P11387 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.82□□□□□ -1.96
TOP1P11387 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TOP1P11387 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
TOP1P11387 U8.8-201ENST00000365399 135 ntBASIC2.81□□□□□ -1.96
TOP1P11387 Y_RNA.408-201ENST00000383987 102 ntBASIC2.81□□□□□ -1.96
TOP1P11387 SNORD65.1-201ENST00000390889 71 ntBASIC2.81□□□□□ -1.96
TOP1P11387 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TOP1P11387 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.81□□□□□ -1.96
TOP1P11387 LUZP4P1-201ENST00000415420 344 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.81□□□□□ -1.96
TOP1P11387 AC099548.1-201ENST00000421443 426 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AC098614.2-201ENST00000426040 255 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AL035407.1-201ENST00000429211 571 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AC098826.1-201ENST00000433943 471 ntBASIC2.81□□□□□ -1.96
TOP1P11387 EEF1A1P39-201ENST00000440791 250 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AC026410.2-201ENST00000460281 156 ntBASIC2.81□□□□□ -1.96
TOP1P11387 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.81□□□□□ -1.96
TOP1P11387 AC023424.2-201ENST00000493479 777 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.81□□□□□ -1.96
TOP1P11387 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.81□□□□□ -1.96
TOP1P11387 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.81□□□□□ -1.96
TOP1P11387 AC113347.3-201ENST00000509113 148 ntBASIC2.81□□□□□ -1.96
TOP1P11387 RNU6-311P-201ENST00000516224 102 ntBASIC2.81□□□□□ -1.96
TOP1P11387 SCARNA15.2-201ENST00000516409 127 ntBASIC2.81□□□□□ -1.96
TOP1P11387 Y_RNA.717-201ENST00000517106 92 ntBASIC2.81□□□□□ -1.96
TOP1P11387 RNU6-1261P-201ENST00000517194 104 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AP001189.2-201ENST00000527320 189 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AC021269.2-201ENST00000532318 330 ntBASIC2.81□□□□□ -1.96
TOP1P11387 OR5BN1P-201ENST00000532955 829 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.81□□□□□ -1.96
TOP1P11387 AC125611.1-201ENST00000549563 229 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.81□□□□□ -1.96
TOP1P11387 HSPE1P3-201ENST00000559254 309 ntBASIC2.81□□□□□ -1.96
TOP1P11387 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.81□□□□□ -1.96
TOP1P11387 AC004853.1-201ENST00000604902 698 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.81□□□□□ -1.96
TOP1P11387 AC092106.3-201ENST00000611308 722 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AC093838.1-201ENST00000613014 469 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AL590808.1-201ENST00000618696 141 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AL022578.1-201ENST00000439330 1433 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AC099786.3-201ENST00000565735 1410 ntBASIC2.81□□□□□ -1.96
TOP1P11387 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.81□□□□□ -1.96
TOP1P11387 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.81□□□□□ -1.96
TOP1P11387 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TOP1P11387 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
TOP1P11387 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
TOP1P11387 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TOP1P11387 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TOP1P11387 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TOP1P11387 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.8□□□□□ -1.96
TOP1P11387 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TOP1P11387 RNU4-92P-201ENST00000363783 136 ntBASIC2.8□□□□□ -1.96
TOP1P11387 RNU6-461P-201ENST00000364195 107 ntBASIC2.8□□□□□ -1.96
TOP1P11387 MIR325-201ENST00000385260 98 ntBASIC2.8□□□□□ -1.96
TOP1P11387 RNA5SP508-201ENST00000411327 119 ntBASIC2.8□□□□□ -1.96
TOP1P11387 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.8□□□□□ -1.96
TOP1P11387 MTATP6P27-201ENST00000416987 621 ntBASIC2.8□□□□□ -1.96
TOP1P11387 AC018630.2-202ENST00000422992 927 ntBASIC2.8□□□□□ -1.96
TOP1P11387 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.8□□□□□ -1.96
TOP1P11387 AC093155.1-201ENST00000440164 826 ntBASIC2.8□□□□□ -1.96
TOP1P11387 FGF7P5-201ENST00000441829 291 ntBASIC2.8□□□□□ -1.96
TOP1P11387 Z73417.1-201ENST00000447373 778 ntBASIC2.8□□□□□ -1.96
TOP1P11387 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.8□□□□□ -1.96
TOP1P11387 AC009961.3-201ENST00000449832 765 ntBASIC2.8□□□□□ -1.96
TOP1P11387 MTCO3P11-201ENST00000455103 774 ntBASIC2.8□□□□□ -1.96
TOP1P11387 USP9YP25-201ENST00000457708 443 ntBASIC2.8□□□□□ -1.96
TOP1P11387 AC069528.1-202ENST00000482888 637 ntBASIC2.8□□□□□ -1.96
TOP1P11387 AC026436.1-201ENST00000510537 270 ntBASIC2.8□□□□□ -1.96
TOP1P11387 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.8□□□□□ -1.96
TOP1P11387 AC112673.1-201ENST00000513168 575 ntBASIC2.8□□□□□ -1.96
TOP1P11387 SNORA31.22-201ENST00000517204 135 ntBASIC2.8□□□□□ -1.96
TOP1P11387 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.8□□□□□ -1.96
TOP1P11387 EEF1A1P37-201ENST00000522748 715 ntBASIC2.8□□□□□ -1.96
TOP1P11387 MTCO2P15-201ENST00000532655 656 ntBASIC2.8□□□□□ -1.96
TOP1P11387 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
TOP1P11387 AP002770.2-201ENST00000543613 532 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms