Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC6P09630 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXC6P09630 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXC6P09630 RIOK3P1-201ENST00000418778 1528 ntBASIC3.65□□□□□ -1.83
HOXC6P09630 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC6P09630 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC6P09630 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HOXC6P09630 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC6P09630 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC6P09630 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HOXC6P09630 SNORD82-201ENST00000365530 70 ntBASIC3.64□□□□□ -1.83
HOXC6P09630 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC6P09630 NUP35P2-201ENST00000416748 943 ntBASIC3.64□□□□□ -1.83
HOXC6P09630 AL353193.1-201ENST00000421444 268 ntBASIC3.64□□□□□ -1.83
HOXC6P09630 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC6P09630 AC019097.1-201ENST00000424783 735 ntBASIC3.64□□□□□ -1.83
HOXC6P09630 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC6P09630 HMGB1P15-201ENST00000453854 435 ntBASIC3.64□□□□□ -1.83
HOXC6P09630 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC6P09630 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC6P09630 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXC6P09630 ADI1P3-201ENST00000549509 470 ntBASIC3.64□□□□□ -1.83
HOXC6P09630 AL512360.1-201ENST00000555346 234 ntBASIC3.64□□□□□ -1.83
HOXC6P09630 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC6P09630 H3F3AP1-201ENST00000559984 334 ntBASIC3.64□□□□□ -1.83
HOXC6P09630 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.64□□□□□ -1.83
HOXC6P09630 UBL5P2-201ENST00000583788 219 ntBASIC3.64□□□□□ -1.83
HOXC6P09630 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC6P09630 YWHAQP7-201ENST00000603536 658 ntBASIC3.64□□□□□ -1.83
HOXC6P09630 AC245014.2-201ENST00000603689 287 ntBASIC3.64□□□□□ -1.83
HOXC6P09630 AC246785.4-201ENST00000605374 287 ntBASIC3.64□□□□□ -1.83
HOXC6P09630 AP003117.2-201ENST00000606010 545 ntBASIC3.64□□□□□ -1.83
HOXC6P09630 AL355472.4-201ENST00000610233 626 ntBASIC3.64□□□□□ -1.83
HOXC6P09630 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC6P09630 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC6P09630 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC6P09630 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HOXC6P09630 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
HOXC6P09630 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC6P09630 CASC19-280ENST00000642102 1351 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXC6P09630 AC073544.1-201ENST00000600110 1595 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC6P09630 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXC6P09630 RNU5E-1-201ENST00000362477 120 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 SNORA5B-201ENST00000363786 132 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 Y_RNA.295-201ENST00000364918 102 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 RNU6-1103P-201ENST00000384150 107 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 RNU6-1207P-201ENST00000384343 107 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 RNU6-876P-201ENST00000391295 104 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 RN7SKP220-201ENST00000410611 288 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AMD1P2-201ENST00000412936 992 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC6P09630 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXC6P09630 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC6P09630 MTND3P17-201ENST00000416968 344 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AL139413.1-201ENST00000421309 217 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AC007283.2-201ENST00000424739 197 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXC6P09630 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC6P09630 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC6P09630 AC112653.1-201ENST00000443851 386 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC6P09630 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXC6P09630 MTND2P24-201ENST00000453434 806 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AL359385.1-201ENST00000456509 365 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC6P09630 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC6P09630 AC087385.1-201ENST00000475062 312 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AC034222.1-201ENST00000494052 532 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC6P09630 AC010493.1-201ENST00000513479 292 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 SNORA70.14-201ENST00000516205 110 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 MIR2276-201ENST00000516886 89 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 RNU6-1220P-201ENST00000517126 108 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AC107934.1-201ENST00000522215 217 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC6P09630 PTP4A1P6-201ENST00000531034 478 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AC092470.1-201ENST00000546187 132 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC6P09630 AL845331.3-202ENST00000562856 261 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 MIR3167-201ENST00000579623 85 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AC005730.3-201ENST00000583067 366 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.63□□□□□ -1.83
HOXC6P09630 AL353997.4-201ENST00000586196 166 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 NRBF2P1-201ENST00000587407 859 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AC008277.2-201ENST00000605196 797 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 AC105429.2-201ENST00000610567 517 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXC6P09630 AC091953.2-201ENST00000623979 160 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC6P09630 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HOXC6P09630 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HOXC6P09630 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC6P09630 ZNF33CP-201ENST00000432492 2030 ntBASIC3.63□□□□□ -1.83
HOXC6P09630 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXC6P09630 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXC6P09630 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC6P09630 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC6P09630 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms