Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AP004289.2-201ENST00000444413 1457 ntBASIC3.85□□□□□ -1.79
TOP3BO95985 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TOP3BO95985 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TOP3BO95985 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
TOP3BO95985 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
TOP3BO95985 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TOP3BO95985 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.84□□□□□ -1.79
TOP3BO95985 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.84□□□□□ -1.79
TOP3BO95985 RNA5SP258-201ENST00000362750 119 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 RNU6-339P-201ENST00000384310 107 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 RNU6-1207P-201ENST00000384343 107 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
TOP3BO95985 AL138878.1-201ENST00000405131 347 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.84□□□□□ -1.79
TOP3BO95985 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.84□□□□□ -1.79
TOP3BO95985 RPL21P109-201ENST00000422213 475 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 AL606489.2-201ENST00000433886 234 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 USP9YP15-201ENST00000442391 422 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 MTND1P18-201ENST00000448191 573 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 AC140076.1-201ENST00000449897 361 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 AC008481.1-201ENST00000463278 396 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.84□□□□□ -1.79
TOP3BO95985 AC093278.1-201ENST00000494700 600 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 RAC1P2-201ENST00000511164 579 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 SCARNA14-201ENST00000516903 136 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.84□□□□□ -1.79
TOP3BO95985 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TOP3BO95985 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TOP3BO95985 AC243972.3-201ENST00000539655 198 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.84□□□□□ -1.79
TOP3BO95985 AC078814.3-201ENST00000553036 491 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.84□□□□□ -1.79
TOP3BO95985 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.84□□□□□ -1.79
TOP3BO95985 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.84□□□□□ -1.79
TOP3BO95985 MIR3118-1-201ENST00000581787 76 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 AL137843.1-201ENST00000605078 385 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 DISC2.1-201ENST00000612827 205 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 AL160413.1-201ENST00000622780 310 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 AC009161.2-201ENST00000624626 138 ntBASIC3.84□□□□□ -1.79
TOP3BO95985 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TOP3BO95985 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TOP3BO95985 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
TOP3BO95985 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.84□□□□□ -1.8
TOP3BO95985 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
TOP3BO95985 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TOP3BO95985 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TOP3BO95985 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
TOP3BO95985 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
TOP3BO95985 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
TOP3BO95985 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TOP3BO95985 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TOP3BO95985 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
TOP3BO95985 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
TOP3BO95985 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TOP3BO95985 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TOP3BO95985 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TOP3BO95985 MIR423-201ENST00000362201 94 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 RNU6-1120P-201ENST00000362988 108 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 RNU6-97P-201ENST00000363387 104 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 RNU4-1-201ENST00000363925 141 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 Y_RNA.234-201ENST00000364409 97 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TOP3BO95985 SNORA69-201ENST00000383895 132 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 SNORA20.2-201ENST00000383922 131 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 U3.29-201ENST00000391296 212 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 AL590004.1-201ENST00000405321 300 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 HSPE1P8-201ENST00000406997 288 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 Z98941.1-201ENST00000407764 100 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 RNU6-1068P-201ENST00000410958 103 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 RNU6-373P-201ENST00000411247 98 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.83□□□□□ -1.8
TOP3BO95985 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.83□□□□□ -1.8
TOP3BO95985 AC005534.2-201ENST00000431047 433 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.83□□□□□ -1.8
TOP3BO95985 AC016691.1-201ENST00000441321 413 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 MTND4P19-201ENST00000446659 478 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.83□□□□□ -1.8
TOP3BO95985 SNRPGP5-201ENST00000456003 220 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 RNU6-261P-201ENST00000459506 102 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 AC084198.1-201ENST00000477747 402 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.83□□□□□ -1.8
TOP3BO95985 MTND5P5-201ENST00000503764 376 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 COX7A2P2-201ENST00000505291 250 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 AC010587.1-201ENST00000505809 469 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 HMGN1P11-201ENST00000508668 303 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.83□□□□□ -1.8
TOP3BO95985 SNORA40.12-201ENST00000516329 111 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 IGKV2D-23-201ENST00000518179 286 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 OR5B10P-201ENST00000532869 642 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.83□□□□□ -1.8
TOP3BO95985 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.83□□□□□ -1.8
TOP3BO95985 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.83□□□□□ -1.8
TOP3BO95985 AC121334.2-201ENST00000605387 271 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 Y_RNA.812-201ENST00000610788 101 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 Y_RNA.784-201ENST00000613803 101 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 Y_RNA.787-201ENST00000616522 101 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 Y_RNA.780-201ENST00000617336 101 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 Y_RNA.801-201ENST00000619005 101 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms