Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.73□□□□□ -1.65
ALX3O95076 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
ALX3O95076 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
ALX3O95076 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
ALX3O95076 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.73□□□□□ -1.65
ALX3O95076 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ALX3O95076 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.73□□□□□ -1.65
ALX3O95076 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
ALX3O95076 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ALX3O95076 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ALX3O95076 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.72□□□□□ -1.65
ALX3O95076 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
ALX3O95076 MIR375-201ENST00000362103 64 ntBASIC4.72□□□□□ -1.65
ALX3O95076 RNU6-858P-201ENST00000362436 107 ntBASIC4.72□□□□□ -1.65
ALX3O95076 RNU6-821P-201ENST00000390995 107 ntBASIC4.72□□□□□ -1.65
ALX3O95076 MIR190B-201ENST00000401119 79 ntBASIC4.72□□□□□ -1.65
ALX3O95076 AL096701.2-201ENST00000416920 238 ntBASIC4.72□□□□□ -1.65
ALX3O95076 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.72□□□□□ -1.65
ALX3O95076 PPP1R11P2-201ENST00000423543 382 ntBASIC4.72□□□□□ -1.65
ALX3O95076 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ALX3O95076 AC090774.1-201ENST00000435925 246 ntBASIC4.72□□□□□ -1.65
ALX3O95076 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.72□□□□□ -1.65
ALX3O95076 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.72□□□□□ -1.65
ALX3O95076 PRDX3P3-201ENST00000447765 522 ntBASIC4.72□□□□□ -1.65
ALX3O95076 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.72□□□□□ -1.65
ALX3O95076 AL445665.1-202ENST00000452436 324 ntBASIC4.72□□□□□ -1.65
ALX3O95076 AC108161.1-201ENST00000461060 402 ntBASIC4.72□□□□□ -1.65
ALX3O95076 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.72□□□□□ -1.65
ALX3O95076 RN7SL583P-201ENST00000475692 287 ntBASIC4.72□□□□□ -1.65
ALX3O95076 RNU6-615P-201ENST00000516065 106 ntBASIC4.72□□□□□ -1.65
ALX3O95076 RNU6-479P-201ENST00000516348 105 ntBASIC4.72□□□□□ -1.65
ALX3O95076 RN7SKP147-201ENST00000517154 244 ntBASIC4.72□□□□□ -1.65
ALX3O95076 MTND5P41-201ENST00000517498 206 ntBASIC4.72□□□□□ -1.65
ALX3O95076 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.72□□□□□ -1.65
ALX3O95076 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.72□□□□□ -1.65
ALX3O95076 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.72□□□□□ -1.65
ALX3O95076 OR4H12P-201ENST00000556269 907 ntBASIC4.72□□□□□ -1.65
ALX3O95076 RPL23AP87-202ENST00000573039 466 ntBASIC4.72□□□□□ -1.65
ALX3O95076 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.72□□□□□ -1.65
ALX3O95076 AC123786.2-201ENST00000603459 275 ntBASIC4.72□□□□□ -1.65
ALX3O95076 AC009318.2-201ENST00000610917 651 ntBASIC4.72□□□□□ -1.65
ALX3O95076 AC109583.2-201ENST00000617367 129 ntBASIC4.72□□□□□ -1.65
ALX3O95076 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.72□□□□□ -1.65
ALX3O95076 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.72□□□□□ -1.65
ALX3O95076 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.72□□□□□ -1.65
ALX3O95076 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ALX3O95076 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ALX3O95076 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.72□□□□□ -1.65
ALX3O95076 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
ALX3O95076 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ALX3O95076 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ALX3O95076 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.72□□□□□ -1.65
ALX3O95076 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
ALX3O95076 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ALX3O95076 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
ALX3O95076 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.71□□□□□ -1.65
ALX3O95076 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
ALX3O95076 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
ALX3O95076 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
ALX3O95076 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ALX3O95076 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.71□□□□□ -1.66
ALX3O95076 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.71□□□□□ -1.66
ALX3O95076 Y_RNA.44-201ENST00000362676 108 ntBASIC4.71□□□□□ -1.66
ALX3O95076 RNU6-989P-201ENST00000362756 107 ntBASIC4.71□□□□□ -1.66
ALX3O95076 SNORD113-8-201ENST00000363497 74 ntBASIC4.71□□□□□ -1.66
ALX3O95076 Y_RNA.304-201ENST00000365011 112 ntBASIC4.71□□□□□ -1.66
ALX3O95076 RNU6-290P-201ENST00000365212 101 ntBASIC4.71□□□□□ -1.66
ALX3O95076 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ALX3O95076 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ALX3O95076 RNU6-22P-201ENST00000384355 107 ntBASIC4.71□□□□□ -1.66
ALX3O95076 MIR135A2-201ENST00000384854 100 ntBASIC4.71□□□□□ -1.66
ALX3O95076 DPPA2P3-201ENST00000411853 655 ntBASIC4.71□□□□□ -1.66
ALX3O95076 AC092447.6-201ENST00000414578 210 ntBASIC4.71□□□□□ -1.66
ALX3O95076 AC093655.2-201ENST00000425735 631 ntBASIC4.71□□□□□ -1.66
ALX3O95076 BTF3P6-201ENST00000448054 499 ntBASIC4.71□□□□□ -1.66
ALX3O95076 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.71□□□□□ -1.66
ALX3O95076 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.71□□□□□ -1.66
ALX3O95076 RN7SKP210-201ENST00000459176 261 ntBASIC4.71□□□□□ -1.66
ALX3O95076 RPL23AP2-201ENST00000471227 466 ntBASIC4.71□□□□□ -1.66
ALX3O95076 HMGN1P11-201ENST00000508668 303 ntBASIC4.71□□□□□ -1.66
ALX3O95076 AC114781.3-201ENST00000512083 142 ntBASIC4.71□□□□□ -1.66
ALX3O95076 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.71□□□□□ -1.66
ALX3O95076 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.71□□□□□ -1.66
ALX3O95076 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ALX3O95076 AL590705.4-201ENST00000532209 134 ntBASIC4.71□□□□□ -1.66
ALX3O95076 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.71□□□□□ -1.66
ALX3O95076 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.71□□□□□ -1.66
ALX3O95076 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.71□□□□□ -1.66
ALX3O95076 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.71□□□□□ -1.66
ALX3O95076 AC108738.1-201ENST00000603703 237 ntBASIC4.71□□□□□ -1.66
ALX3O95076 AP000787.2-201ENST00000604432 568 ntBASIC4.71□□□□□ -1.66
ALX3O95076 AC123912.5-201ENST00000605470 343 ntBASIC4.71□□□□□ -1.66
ALX3O95076 Mico1.1-201ENST00000611698 204 ntBASIC4.71□□□□□ -1.66
ALX3O95076 AL450472.3-201ENST00000615578 367 ntBASIC4.71□□□□□ -1.66
ALX3O95076 AP001005.3-201ENST00000622049 129 ntBASIC4.71□□□□□ -1.66
ALX3O95076 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ALX3O95076 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
ALX3O95076 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
ALX3O95076 AP001148.1-201ENST00000624124 2359 ntBASIC4.71□□□□□ -1.66
ALX3O95076 SALL4P2-201ENST00000423288 2910 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms