Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 OR6C7P-201ENST00000547875 934 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AP000403.1-201ENST00000603349 851 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AL035413.2-201ENST00000604801 525 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AC090578.1-201ENST00000604955 591 ntBASIC3.23□□□□□ -1.89
CACNA1FO60840 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.23□□□□□ -1.89
CACNA1FO60840 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.23□□□□□ -1.89
CACNA1FO60840 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.23□□□□□ -1.89
CACNA1FO60840 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.23□□□□□ -1.89
CACNA1FO60840 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CACNA1FO60840 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CACNA1FO60840 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
CACNA1FO60840 AC004944.1-201ENST00000517807 3059 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 ELF2P3-201ENST00000445099 1506 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 RNU5F-6P-201ENST00000362979 116 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.22□□□□□ -1.89
CACNA1FO60840 SNORA75-201ENST00000384158 137 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 MIR27B-201ENST00000385129 97 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 MTCYBP36-201ENST00000404146 440 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 RNU2-28P-201ENST00000410457 189 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.22□□□□□ -1.89
CACNA1FO60840 MRPL50P2-201ENST00000416821 482 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 AC009963.1-201ENST00000417265 157 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.22□□□□□ -1.89
CACNA1FO60840 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.22□□□□□ -1.89
CACNA1FO60840 YWHAZP8-201ENST00000436935 731 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 AL031667.1-201ENST00000440222 725 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 COX6CP12-201ENST00000446748 202 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 MEMO1P3-201ENST00000459811 302 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 MTAPP1-201ENST00000489154 819 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.22□□□□□ -1.89
CACNA1FO60840 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.22□□□□□ -1.89
CACNA1FO60840 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.22□□□□□ -1.89
CACNA1FO60840 RNU6-506P-201ENST00000516553 94 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 EEF1B2P4-201ENST00000551398 348 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.22□□□□□ -1.89
CACNA1FO60840 AL391840.1-201ENST00000571144 367 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 MIR5697-201ENST00000578045 78 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 AP003117.2-201ENST00000606010 545 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 AP004247.3-201ENST00000608682 624 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 AC079228.1-201ENST00000624774 1049 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 AC120349.2-201ENST00000625002 298 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 AC005609.4-201ENST00000625071 447 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 AC026634.1-201ENST00000634369 198 ntBASIC3.22□□□□□ -1.89
CACNA1FO60840 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
CACNA1FO60840 RNU6-660P-201ENST00000364566 109 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 RNU6-621P-201ENST00000364752 109 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 RNA5SP189-201ENST00000364920 115 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.21□□□□□ -1.89
CACNA1FO60840 SUGT1P1-201ENST00000379514 476 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 RPL21P32-201ENST00000419877 477 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 MTCO1P39-201ENST00000426148 480 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.21□□□□□ -1.89
CACNA1FO60840 AC241584.1-201ENST00000438469 1241 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
CACNA1FO60840 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.21□□□□□ -1.89
CACNA1FO60840 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.21□□□□□ -1.89
CACNA1FO60840 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.21□□□□□ -1.89
CACNA1FO60840 AC092185.1-201ENST00000491371 97 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 RPL30P11-201ENST00000495304 339 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 NDUFB4P2-201ENST00000509515 391 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 OR4A45P-201ENST00000529954 901 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.21□□□□□ -1.89
CACNA1FO60840 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.21□□□□□ -1.89
CACNA1FO60840 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.21□□□□□ -1.89
CACNA1FO60840 AC093519.1-201ENST00000566109 298 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 AC005771.1-201ENST00000585581 349 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 BNIP3P8-201ENST00000597863 560 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 AC013476.2-201ENST00000614456 459 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 U4.5-201ENST00000617137 123 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 AL590808.1-201ENST00000618696 141 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 U4.3-201ENST00000621047 82 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 AL049780.3-201ENST00000624612 1583 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 MTND5P26-201ENST00000426018 1752 ntBASIC3.21□□□□□ -1.89
CACNA1FO60840 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.21□□□□□ -1.9
CACNA1FO60840 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.21□□□□□ -1.9
CACNA1FO60840 XPOTP1-201ENST00000443317 2398 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.21□□□□□ -1.9
CACNA1FO60840 RNA5SP210-201ENST00000391034 120 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 RPS3AP24-201ENST00000407896 734 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 MIR548F1-201ENST00000408667 84 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 RNU6-272P-201ENST00000411028 104 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.21□□□□□ -1.9
CACNA1FO60840 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.21□□□□□ -1.9
CACNA1FO60840 KLF3P2-201ENST00000465138 268 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 RPL31P58-201ENST00000469001 379 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 LARP1BP2-201ENST00000486594 519 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.21□□□□□ -1.9
CACNA1FO60840 NDUFB4P9-201ENST00000511646 388 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.21□□□□□ -1.9
CACNA1FO60840 AP002453.2-201ENST00000533503 320 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 AC068587.4-201ENST00000533893 186 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.21□□□□□ -1.9
CACNA1FO60840 ZNF519P2-201ENST00000557032 169 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 AC009163.5-201ENST00000575421 637 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 LLPHP1-201ENST00000603571 367 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 AP000860.1-201ENST00000605250 559 ntBASIC3.21□□□□□ -1.9
CACNA1FO60840 AC109347.2-201ENST00000610220 349 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms