Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RNU6-198P-201ENST00000384258 104 ntBASIC2.6□□□□□ -1.99
HCN1O60741 RNA5SP354-201ENST00000391247 136 ntBASIC2.6□□□□□ -1.99
HCN1O60741 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.6□□□□□ -1.99
HCN1O60741 AL356057.2-201ENST00000403318 432 ntBASIC2.6□□□□□ -1.99
HCN1O60741 MTCO1P17-201ENST00000411522 491 ntBASIC2.6□□□□□ -1.99
HCN1O60741 NDUFB4P7-201ENST00000423198 363 ntBASIC2.6□□□□□ -1.99
HCN1O60741 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.6□□□□□ -1.99
HCN1O60741 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.6□□□□□ -1.99
HCN1O60741 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.6□□□□□ -1.99
HCN1O60741 NIPA2P5-201ENST00000452282 464 ntBASIC2.6□□□□□ -1.99
HCN1O60741 AP000705.1-201ENST00000454567 350 ntBASIC2.6□□□□□ -1.99
HCN1O60741 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.6□□□□□ -1.99
HCN1O60741 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.6□□□□□ -1.99
HCN1O60741 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HCN1O60741 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HCN1O60741 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.6□□□□□ -1.99
HCN1O60741 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HCN1O60741 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
HCN1O60741 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.6□□□□□ -1.99
HCN1O60741 RNA5SP356-201ENST00000515972 94 ntBASIC2.6□□□□□ -1.99
HCN1O60741 RN7SKP40-201ENST00000517211 242 ntBASIC2.6□□□□□ -1.99
HCN1O60741 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.6□□□□□ -1.99
HCN1O60741 EEF1A1P37-201ENST00000522748 715 ntBASIC2.6□□□□□ -1.99
HCN1O60741 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.6□□□□□ -1.99
HCN1O60741 AL133271.1-201ENST00000538229 291 ntBASIC2.6□□□□□ -1.99
HCN1O60741 HPRT1P3-201ENST00000539521 576 ntBASIC2.6□□□□□ -1.99
HCN1O60741 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.6□□□□□ -1.99
HCN1O60741 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.6□□□□□ -1.99
HCN1O60741 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.6□□□□□ -1.99
HCN1O60741 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.6□□□□□ -1.99
HCN1O60741 AC136618.2-201ENST00000575091 400 ntBASIC2.6□□□□□ -1.99
HCN1O60741 AC138761.3-201ENST00000579993 334 ntBASIC2.6□□□□□ -1.99
HCN1O60741 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.6□□□□□ -1.99
HCN1O60741 AL031281.1-201ENST00000604049 488 ntBASIC2.6□□□□□ -1.99
HCN1O60741 AC013244.3-201ENST00000605614 388 ntBASIC2.6□□□□□ -1.99
HCN1O60741 RNU6-88P-201ENST00000606801 100 ntBASIC2.6□□□□□ -1.99
HCN1O60741 AC097468.3-201ENST00000607956 456 ntBASIC2.6□□□□□ -1.99
HCN1O60741 AC103706.2-201ENST00000638080 240 ntBASIC2.6□□□□□ -1.99
HCN1O60741 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HCN1O60741 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HCN1O60741 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.6□□□□□ -1.99
HCN1O60741 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.6□□□□□ -1.99
HCN1O60741 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.6□□□□□ -1.99
HCN1O60741 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HCN1O60741 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.59□□□□□ -1.99
HCN1O60741 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HCN1O60741 RPL21P132-201ENST00000331267 462 ntBASIC2.59□□□□□ -1.99
HCN1O60741 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
HCN1O60741 RNU1-39P-201ENST00000383897 165 ntBASIC2.59□□□□□ -1.99
HCN1O60741 MIR1290-201ENST00000408735 78 ntBASIC2.59□□□□□ -1.99
HCN1O60741 RN7SKP266-201ENST00000410232 287 ntBASIC2.59□□□□□ -1.99
HCN1O60741 TPMTP3-201ENST00000411928 735 ntBASIC2.59□□□□□ -1.99
HCN1O60741 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.59□□□□□ -1.99
HCN1O60741 AC087499.2-201ENST00000432861 149 ntBASIC2.59□□□□□ -1.99
HCN1O60741 TAAR7P-201ENST00000436141 242 ntBASIC2.59□□□□□ -1.99
HCN1O60741 ARPC3P1-201ENST00000437218 533 ntBASIC2.59□□□□□ -1.99
HCN1O60741 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.59□□□□□ -1.99
HCN1O60741 MTND2P14-201ENST00000482139 351 ntBASIC2.59□□□□□ -1.99
HCN1O60741 AC104685.1-201ENST00000502445 371 ntBASIC2.59□□□□□ -1.99
HCN1O60741 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.59□□□□□ -1.99
HCN1O60741 OR5BM1P-201ENST00000512021 366 ntBASIC2.59□□□□□ -1.99
HCN1O60741 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.59□□□□□ -1.99
HCN1O60741 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.59□□□□□ -1.99
HCN1O60741 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.59□□□□□ -1.99
HCN1O60741 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.59□□□□□ -1.99
HCN1O60741 HMGB1P14-201ENST00000557424 591 ntBASIC2.59□□□□□ -1.99
HCN1O60741 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.59□□□□□ -1.99
HCN1O60741 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.59□□□□□ -1.99
HCN1O60741 AC140725.3-201ENST00000616193 880 ntBASIC2.59□□□□□ -1.99
HCN1O60741 AL355493.4-201ENST00000618530 292 ntBASIC2.59□□□□□ -1.99
HCN1O60741 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.59□□□□□ -2
HCN1O60741 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.59□□□□□ -2
HCN1O60741 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.59□□□□□ -2
HCN1O60741 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.58□□□□□ -2
HCN1O60741 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.58□□□□□ -2
HCN1O60741 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.58□□□□□ -2
HCN1O60741 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.58□□□□□ -2
HCN1O60741 RNU1-105P-201ENST00000363470 161 ntBASIC2.58□□□□□ -2
HCN1O60741 SNORA23-201ENST00000365128 182 ntBASIC2.58□□□□□ -2
HCN1O60741 MIR325-201ENST00000385260 98 ntBASIC2.58□□□□□ -2
HCN1O60741 U3.20-201ENST00000390909 217 ntBASIC2.58□□□□□ -2
HCN1O60741 RNU6-193P-201ENST00000410977 107 ntBASIC2.58□□□□□ -2
HCN1O60741 RNU6-516P-201ENST00000411381 104 ntBASIC2.58□□□□□ -2
HCN1O60741 AC008850.1-201ENST00000427546 362 ntBASIC2.58□□□□□ -2
HCN1O60741 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.58□□□□□ -2
HCN1O60741 AC129850.1-201ENST00000436203 508 ntBASIC2.58□□□□□ -2
HCN1O60741 UBE2V1P13-201ENST00000436983 439 ntBASIC2.58□□□□□ -2
HCN1O60741 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.58□□□□□ -2
HCN1O60741 AL591719.1-201ENST00000444669 744 ntBASIC2.58□□□□□ -2
HCN1O60741 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.58□□□□□ -2
HCN1O60741 MTND1P9-201ENST00000453775 944 ntBASIC2.58□□□□□ -2
HCN1O60741 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.58□□□□□ -2
HCN1O60741 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.58□□□□□ -2
HCN1O60741 AC090525.1-201ENST00000479116 478 ntBASIC2.58□□□□□ -2
HCN1O60741 RPL30P5-201ENST00000494923 336 ntBASIC2.58□□□□□ -2
HCN1O60741 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.58□□□□□ -2
HCN1O60741 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.58□□□□□ -2
HCN1O60741 RNU6-1256P-201ENST00000516539 103 ntBASIC2.58□□□□□ -2
HCN1O60741 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.58□□□□□ -2
HCN1O60741 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms